Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1181 150 3e-31 seq649 149 1e-30 seq2344 107 4e-18 >seq1181 Length=24886 Score = 150 bits (166), Expect = 3e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 |||||| ||||| || | ||| | || || || || |||||||||||||| || || || Sbjct 11310 TCCTCCACGAAGACGAAGTACGAGATGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGA 11251 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 | ||||| || || || | || || || || || || | | ||||||||| ||||| Sbjct 11250 CAATGTCCGGCCGTCCTCGAGTTGTTTTCCCGCAAAAATCAAACGTTGTTGGTCAGGTGG 11191 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 |||||||||||| ||||| || |||| || || ||||||||||| | ||| || || Sbjct 11190 AATGCCTTCCTTATCTTGGATTTTTGATTTTACATTGTCGATGGTGTCCGATGACTCCAC 11131 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || | || || ||||| ||||||||||| || ||||| || ||||| || Sbjct 11130 CTCAAGCGTAATAGTTTTACCCGTGAGGGTTTTCACGAAAATTTGCATGAT 11080 >seq649 Length=19467 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | || ||||| || || || || ||||| ||||| |||||| Sbjct 4220 CCACCGCGAAGACGAAGCACTAAGTGGAGAGTCGATTCCTTTTGTATGTTGTAATCGTTA 4279 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| || || || || | |||||||||||| |||||| Sbjct 4280 AGAGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGGTGGA 4339 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| || ||||| ||||| |||||| || || || |||| ||||||||| Sbjct 4340 ATACCTTCTTTATCTTGGATCTTACTTTTGACGTTGTCTATTGTATCTGAAGATTCTACT 4399 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || ||||| || || | || ||||| ||||||||||| Sbjct 4400 TCAAGAGTTATTGTTTTCCCAGTCAATGTTTTGACAAATATCTGCAT 4446 Score = 136 bits (150), Expect = 7e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || || || ||||||||||||||||| || || Sbjct 5009 CCACCACGAAGACGAAGGACCAAGTGGAGTGTCGATTCTTTTTGGATGTTATAGTCAGAA 5068 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || || || | || || || || || || ||||||||||| ||||| ||| Sbjct 5069 AGTGTTCGACCGTCCTCAAGTTGTTTTCCAGCAAAAATTAGTCTTTGTTGATCGGGAGGA 5128 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| |||||||| || || || || ||||||||||| | || || || Sbjct 5129 ATTCCTTCTTTGTCTTGTATTTTACTTTTTACATTGTCGATGGTGTCAGACGACTCGACC 5188 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | |||||||||||||| |||| Sbjct 5189 TCTAGAGTGATGGTTTTTCCAGTGA 5213 Score = 114 bits (126), Expect = 2e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | || || || || |||||||| ||||| ||||| || Sbjct 4733 CCACCACGAAGACGGAGAACTAGATGAAGGGTAGATTCTTTTTGAATGTTGTAATCAGAT 4792 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | ||||| || | || || || || || || | ||||||||| ||||||||| Sbjct 4793 AATGTTCGACCATCCTCAAGTTGTTTGCCAGCAAAGATTAATCTTTGTTGATCGGGTGGA 4852 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || || || || || || |||||||| | ||| ||||| Sbjct 4853 ATTCCTTCCTTGTCCTGTATTTTACTTTTCACATTATCAATGGTGTCGGATGACTCTACC 4912 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | ||| |||||||| || || Sbjct 4913 TCAAGGGTAATGGTTTTACCAGT 4935 >seq2344 Length=7468 Score = 107 bits (118), Expect = 4e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 ||||| || || ||||| || || || | |||||||| | ||| || || || ||||| Sbjct 4352 TTTTGAATATTGTAATCAGAAAGAGTTCGTCCATCTTCAAGCTGTTTACCAGCAAATATC 4293 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | | |||||| || || || || || || || || || |||||||| || || || Sbjct 4292 AAACGTTGTTGATCAGGGGGGATTCCCTCTTTATCCTGGATCTTTGCTTTCACATTATCA 4233 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || || |||||||| ||||| || || |||||||||||||| Sbjct 4232 ATTGTGTCAGAGGACTCAACCTCTAAGGTGATAGTTTTGCCAGTTAGGGTCTTGACGAA 4174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921549246222000