Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq649 118 9e-22 seq1181 96.9 3e-15 seq2344 84.2 2e-11 >seq649 Length=19467 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 ||||| || | || ||||| ||||| |||||||||||| | | |||||| ||||||| Sbjct 4238 ACTAAGTGGAGAGTCGATTCCTTTTGTATGTTGTAATCGTTAAGAGTACGTCCATCTTCA 4297 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 ||||| || ||||| |||| | | ||||||||||| ||||| |||||||| || Sbjct 4298 AGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGGTGGAATACCTTCTTTATCTTGG 4357 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| ||| | | || | || || | ||||| || || | || | ||||| Sbjct 4358 ATCTTACTTTTGACGTTGTCTATTGTATCTGAAGATTCTACTTCAAGAGTTATTGTTTTC 4417 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || |||| ||||| ||||| ||||||||| || Sbjct 4418 CCAGTCAATGTTTTGACAAATATCTGCATGCCT 4450 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC- 114211 ||||| ||||| || | | ||||| ||| | |||||||||||||||||||||||||| Sbjct 4730 ATACCACCACGAAGACGGAGAACTAGATGAAGGGTAGATTCTTTTTGAATGTTGTAATCA 4789 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 | | || || ||| ||| ||||||||||| ||||| |||| | | ||||| || || Sbjct 4790 GATAAT-GTTCGACCATCCTCAAGTTGTTTGCCAGCAAAGATTAATCTTTGTTGATCGGG 4848 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 ||||| ||||| ||||| || || ||| | | |||| |||||||| || || Sbjct 4849 TGGAATTCCTTCCTTGTCCTGTATTTTACTTTTCACATTATCAATGGTGTCGGATGACTC 4908 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGT 114358 || || | ||| | ||||| || || Sbjct 4909 TACCTCAAGGGTAATGGTTTTACCAGT 4935 Score = 102 bits (112), Expect = 7e-17 Identities = 136/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 |||||||| | || |||||||| || |||||||| || | ||| || ||| ||| Sbjct 4466 ACTAAATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAAAGTTCGGCCATCCTCA 4525 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 |||||||| || || | || | |||||||||||||||||||| |||||||| || | Sbjct 4526 AGTTGTTTTCCTGCAAATATTAATCGCTGTTGGTCCGGAGGAATTCCTTCTTTATCTTGA 4585 Query 114294 ATCTTTTGTTTTAGCTGT--TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTT 114351 | ||||| ||| | || |||| |||||| | || ||||| || | || | |||| Sbjct 4586 A--TTTTGCTTTTGACGTTATCAATGGTGTCAGAAGACTCGACTTCGAGAGTAATAGTTT 4643 Query 114352 TGCCGGT 114358 | ||||| Sbjct 4644 TACCGGT 4650 >seq1181 Length=24886 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 |||||||||||||| |||||||| || || || || || || |||||||| || Sbjct 11279 GTAGATTCTTTTTGGATGTTGTAGTCAGACAATGTCCGGCCGTCCTCGAGTTGTTTTCCC 11220 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || | ||| |||||||| || ||||||||||| || || || ||| |||| Sbjct 11219 GCAAAAATCAAACGTTGTTGGTCAGGTGGAATGCCTTCCTTATCTTGGATTTTTGATTTT 11160 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| | || || || || | || | ||||| || || || ||| Sbjct 11159 ACATTGTCGATGGTGTCCGATGACTCCACCTCAAGCGTAATAGTTTTACCCGTGAGGGTT 11100 Query 114366 TTTACAAAAATCTGCATG 114383 || || ||||| |||||| Sbjct 11099 TTCACGAAAATTTGCATG 11082 >seq2344 Length=7468 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 |||||||| |||||||| | ||| || ||||||||| ||||||||||| | || Sbjct 4352 TTTTGAATATTGTAATCAGAAAGAGTTCGTCCATCTTCAAGCTGTTTACCAGCAAATATC 4293 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 | ||| ||||| || || || || || ||||| || |||||| ||| | | ||| Sbjct 4292 AAACGTTGTTGATCAGGGGGGATTCCCTCTTTATCCTGGATCTTTGCTTTCACATTATCA 4233 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373 | ||||| | ||| || || || | ||| | |||||||| || || || || || || Sbjct 4232 ATTGTGTCAGAGGACTCAACCTCTAAGGTGATAGTTTTGCCAGTTAGGGTCTTGACGAA 4174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420101885536200