Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1181 125 7e-24 seq649 93.3 4e-14 >seq1181 Length=24886 Score = 125 bits (138), Expect = 7e-24 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || ||||| ||||||||||| || || || ||||||||||||||| || | | Sbjct 11276 GATTCTTTTTGGATGTTGTAGTCAGACAATGTCCGGCCGTCCTCGAGTTGTTTTCCCGCA 11217 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || | ||| |||||||| || || || ||||| || || ||||||| ||||| | Sbjct 11216 AAAATCAAACGTTGTTGGTCAGGTGGAATGCCTTCCTTATCTTGGATTTTTGATTTTACA 11157 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | |||||| | ||||||||||| | ||| | |||||||| || || ||||| Sbjct 11156 TTGT-CGATGGTGTCCGATGACTCCACCTCAAGCGTAATAGTTTTACCCGTGAGGGTTTT 11098 Query 138600 TACAAAAATCTGCATG 138615 || ||||| |||||| Sbjct 11097 CACGAAAATTTGCATG 11082 >seq649 Length=19467 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||||| || | | || |||||||| |||||||| ||| | Sbjct 4220 CCACCGCGAAGACGAAGCACTAAGTGGAGAGTCGATTCCTTTTGTATGTTGTAATCGTTA 4279 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || ||||| || || | | |||| | | ||||||||||| || Sbjct 4280 AGAGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGGTGGA 4339 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||||||||| || ||| || ||| | | || | || || | || || || Sbjct 4340 ATACCTTCTTTATCTTGGATCTTACTTTTGACGTTGTCTATTGTATCTGAAGATTCTACT 4399 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || | || | ||||| ||||||| ||||| ||||| ||||||||| || Sbjct 4400 TCAAGAGTTATTGTTTTCCCAGTCAATGTTTTGACAAATATCTGCATGCCT 4450 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| | ||| | |||||||| | | || || || || ||||||||||| Sbjct 4447 GCCTCCTCTTAGACGAAGCACTAAATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGA 4506 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| || ||||| |||||||| || | | | |||| ||||||||||||||||| Sbjct 4507 TAAAGTTCGGCCATCCTCAAGTTGTTTTCCTGCAAATATTAATCGCTGTTGGTCCGGAGG 4566 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT-AATTGTTCCACGGTGTCGGTCGACTCCA 138565 || |||||||| || ||| |||| |||| | | || | |||||| | ||||| | Sbjct 4567 AATTCCTTCTTTATC-TTGAATTTTGCTTTTGACGTTATCAATGGTGTCAGAAGACTCGA 4625 Query 138566 CCTCGACCGTCAGCGTTTTACCAGT 138590 | |||| || | |||||||| || Sbjct 4626 CTTCGAGAGTAATAGTTTTACCGGT 4650 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 || || || | ||| | ||||| ||| | | | || || |||||||||||||| || | | Sbjct 4733 CCACCACGAAGACGGAGAACTAGATGAAGGGTAGATTCTTTTTGAATGTTGTAATCAGAT 4792 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || ||||| |||||||| || | | |||||| | ||||| || || || Sbjct 4793 AAT-GTTCGACCATCCTCAAGTTGTTTGCCAGCAAAGATTAATCTTTGTTGATCGGGTGG 4851 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||||| ||| | | || | |||||||| ||||| || Sbjct 4852 AATTCCTTCCTTGTCCTGTATTTTACTTTTCACATTATCAATGGTGTCGGATGACTCTAC 4911 Query 138567 CTCGACCGTCAGCGTTTTACCAGT 138590 ||| | || | ||||||||||| Sbjct 4912 CTCAAGGGTAATGGTTTTACCAGT 4935 Score = 86.0 bits (94), Expect = 6e-12 Identities = 123/171 (72%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || ||||| ||||| ||||| | || || |||||| |||||||| || | | Sbjct 5042 GATTCTTTTTGGATGTTATAGTCAGAAAGTGTTCGACCGTCCTCAAGTTGTTTTCCAGCA 5101 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | ||||| | ||||| || ||||| || ||||||||||| ||||| ||||| | Sbjct 5102 AAAATTAGTCTTTGTTGATCGGGAGGAATTCCTTCTTTGTCTTGTATTTTACTTTTTACA 5161 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGT 138590 ||| || | |||||| | |||||| ||||| | || | ||||| ||||| Sbjct 5162 TTG-TCGATGGTGTCAGACGACTCGACCTCTAGAGTGATGGTTTTTCCAGT 5211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496223009172000