Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2786 549 2e-151 seq3361 217 2e-51 seq552 199 5e-46 seq307 105 8e-18 >seq2786 Length=21599 Score = 549 bits (608), Expect = 2e-151 Identities = 1080/1588 (68%), Gaps = 23/1588 (1%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||| || | ||||| ||||| || || | ||| | ||||| || || || || Sbjct 14804 TTCATCATCTGCCTTATATTTTTCAGCTTCAGACAACATTCTCTCAATATCCTCCTTGGA 14863 Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTC 6687 | | || ||||| || ||||| |||||| | |||||| || | |||| || Sbjct 14864 AAGACGTCCTTTATCGTTTGTAATGACAATCTTGTTGGATTTTCCAGTTCCCTTTTCAAG 14923 Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747 || |||||||| ||| || |||||||| | ||| || | || | ||||| ||| Sbjct 14924 GGCTGATACATTCATAATTCCGTTTGCATCCAAATCAAAAGTAACCTCTATTTGGGGTAC 14983 Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807 ||| | || || | |||||| || ||||| |||||| ||||||| | | |||| || | Sbjct 14984 ACCACGTGGGGCAGGTGGAATTCCAGTTAACTCAAATTTACCAAGGAGATTGTTGTCTTT 15043 Query 6808 CGCCTTCTTA--CGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGT 6865 | ||| | || ||||| ||| | |||| || || |||||||||| || Sbjct 15044 TG--TTCGTTGTCGCTCACCCTCAAAAACTTGTATGAGAACACCAGGTTGATTGTCAGAG 15101 Query 6866 GCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGG 6925 ||||| || | || ||||||| || || || || ||||| ||||| | | Sbjct 15102 TAAGTTGAAAATACTTCAGACTTCTTAGTGGGGATAGTAGTGTTTCTAGGAATCAATTTG 15161 Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||| ||||| ||||| | ||| || || || |||| || || | |||| Sbjct 15162 GTCATCTGCCCACCAGCGGTTTCTATTCCGAGTGAGAGTGGTGCGACATCGAGTAGTAGG 15221 Query 6986 AGGTCTT----GAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041 | || | | || | | | | |||| | || || || |||||||||| || Sbjct 15222 ATTTCATTTGTGGACTTAGAAGATGTAT-CACCTGACAAAATTGCAGCTTGGACCGCAGC 15280 Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATA 7101 || || || || || ||||| || || || | |||||| ||||||| || || ||||| Sbjct 15281 ACCATAAGCTACTGCTTCATCAGGATTGATTGATTTATTGGGTTCTTTGCCATTGAAATA 15340 Query 7102 ATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161 ||||| | | || ||| || | || ||||| || |||||||| || | ||| || || Sbjct 15341 ATCCGTGATAAGTTTTTGGATCCTGGGAATTCGCGTTGATCCACCAACTAGAACAATCTC 15400 Query 7162 ATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT--- 7218 || || || ||||| || || || | ||| || || || || | Sbjct 15401 ATGTACCTTTGATTTGTCAATTTTGGCGTCAGCTAGAACACGATCTACTGGGGTAGTGGT 15460 Query 7219 ACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATA 7278 | || | ||| | ||| || |||||||||||||| || ||||||||||||||||| Sbjct 15461 AGATCT---GAAAAGGTCTTGGCAGAGTTCCTCAAAACGAGCTCGGGTAATGGATGTATA 15517 Query 7279 GAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAA 7338 ||| || | || || ||| ||||||||||| |||| ||| || || | || |||| Sbjct 15518 GAAGTCGATACCTTCAAATAGTGAATCAATTTCGATGGATGTCTGGGCAGATGAGGATAG 15577 Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA 7398 ||||| ||||| || ||||| || ||||| | ||| | || || | | ||| || Sbjct 15578 TGTTCGTTTTGCTCGTTCACATGCGGTTCGAAGACGTCTTAGTGCTCTAGCGTTTGAAGA 15637 Query 7399 AATATCTTTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAAT 7457 | ||||||||| ||||| || |||||||| || | | ||||| | ||||| | Sbjct 15638 TAAATCTTTCTTGTGTTTGCGCTTAAACTCATTTACA-AAGTGGTTGACGAGTCGGTTGT 15696 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 |||||||||| || |||||||| ||||| || ||||| | ||||||||||| || ||| Sbjct 15697 CGAAATCTTCTCCTCCCAAGTGAGTATCTCCTGCGGTTGACTTGACTTCAAAAATTCCTT 15756 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | ||||| | || | || |||||||| || || || || | |||||| |||||||| | Sbjct 15757 CCTCAATTGTCAATAGTGACACATCAAAGGTTCCTCCTCCTAAGTCAAAGATGAGTACAT 15816 Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 | | || | || ||||| || ||||||||||| ||||| || || || || |||| Sbjct 15817 TTCTCTCTCCCTCGACCTTCTTGTCAAGACCGTACGCAATAGCAGCAGCTGTGGGCTCAT 15876 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 |||| ||||| ||| || || ||||||||| | |||||||| || ||||||| || Sbjct 15877 TAATGATACGGAGAACATTTAGTCCAGCAATAAGACCTGCATCTTTGGTAGCTTGTCTTT 15936 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | ||||| || ||||| || || || |||||||| || | |||| |||| |||| Sbjct 15937 GAGAATCATTGAAGTACGCAGGCACTGTTACGACAGCATTGTCAACTTGTGTACCTAGAT 15996 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 ||| || || | || ||||||||||| || ||||| || || || ||||||| | | Sbjct 15997 ACGCCTCTGCCGTCTCCTTCATTTTGGTGAGTACCATGGAAGAGATTTCTTCAGGTGTGA 16056 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877 ||||||| || || || || || ||||||| || | ||||| |||| | | Sbjct 16057 ACTGTTTGGTCTCTCCTTTGAAGACAACTTCGATGACTGGTTT---GCCAGCCTTGTCTA 16113 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 | ||| | | | | |||||||| ||| || | |||| | |||||||| | Sbjct 16114 CTATCTTGAATGGGAAGTGCTTCATATCAGATTGTACTTCAGGGTCGGCAAACTTTCGGC 16173 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 | || ||||| || || |||||||||||||| | || ||||| || ||| || || | Sbjct 16174 CTATCAGACGTTTGGCGTCAAAAACTGTGTTGGTTGGATTCATTGCGACTTGATTTTTAG 16233 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 | || || || || | |||||| || |||||||| || || | || || || |||| Sbjct 16234 CAGCATCACCAATTAAGCGTTCAGTA---TCCGTAAATGCTACAAAGGAAGGTGTAGTTC 16290 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117 |||| |||||||| || || || ||||| | || || | | | | || || || | Sbjct 16291 GATTTCCTTGGTCATTGGCGATGATTTCAATTCGATCATCTCTGAAAATACCAACACAAG 16350 Query 8118 AATACGTTGTTCCTAAATCAATACCGAT 8145 | || || ||||||||||| ||||| || Sbjct 16351 AGTATGTAGTTCCTAAATCGATACCTAT 16378 >seq3361 Length=29292 Score = 217 bits (240), Expect = 2e-51 Identities = 818/1259 (65%), Gaps = 47/1259 (4%) Strand=Plus/Minus Query 6572 TCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAAT 6631 |||||||| || || || || ||||| ||||| || || || |||| | || Sbjct 6557 TCTTCATCAGCGTATTTCTCGGCTTCTTGAACCATTCGATCTATTTCGTCTTGAGTTAGA 6498 Query 6632 CTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCA 6691 | ||| ||||| || ||||| || || || || || |||| | |||||| |||| Sbjct 6497 CGCCCTTTATCGTTAGTAATGGTTATTGACTCCGACTTCCCCGTTCCTTTATCTGAAGCA 6438 Query 6692 CTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCC 6751 || |||| ||||||||| || |||| || || || | || || || |||| Sbjct 6437 GAGACTTTCAGAATACCATTAGCGTCAAGTTCAAAAGAGACCTCGATCTGAGGAACACCC 6378 Query 6752 CTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCC 6811 || ||||| | || ||||| || | |||||| | || ||| | |||||||| | | | Sbjct 6377 CTTGGTGCTGGAGGGATACCAGTCAGCTCAAATTTCCCGAGTTGATTGTTATCCTTAGTC 6318 Query 6812 TTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTT 6871 | ||||| ||||||||||| | |||| || | |||||||| || || || Sbjct 6317 AAGGTTCGTTCTCCTTCATAGACCTGAATTAAAACGACTGGTTGATTGTCAACGGCAGTC 6258 Query 6872 GAGAAGATTTGTT-CTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCAT 6930 ||||| || || |||||| | ||||| |||||||| || || | | ||||| Sbjct 6257 GAGAAAATCTGCGACTTTCTGGTA-GGAATAACAGTATTTCTAGGGATGAGCTTCGTCAT 6199 Query 6931 AATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTC 6990 | |||||| | ||||| | ||| || | || || | ||||||| ||||| | || Sbjct 6198 GACACCACCAGTTGTTTCAATTCCGAGTGTAAGGGGATTGACGTCCATGAGTACTAAATC 6139 Query 6991 TTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGC 7050 || ||| | | ||| |||||||| || | | | | ||||| | || || | || Sbjct 6138 TT---CAG-TACCTTC--TTCACCCGATAGAACGCCTCCCTGGACGGCTGCACCAAAAGC 6085 Query 7051 GACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATC--CGAT 7108 ||| || ||||| || |||||| ||| || ||||| ||| | || | || Sbjct 6084 GACAGCTTCATCAGGATTAATCCCTTTGGAGGCTTTCTTACCACCAAAGAACTCTTCAAT 6025 Query 7109 AACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACT 7168 || || || ||| || || || || || || ||||| | ||| || |||| || Sbjct 6024 AAG--TTCAACAACTTTTGGAATCCGGGTAGAACCTCCGACAAGAACAATATCATCAACC 5967 Query 7169 TTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGG 7228 | || || | || ||||| |||| || | ||||||||||| | |||||| Sbjct 5966 TCAGACTTCTTGACCTTTGCGTCTTTGAGCACCTGTTCGACAGGTTTAAGTGTCTTACGG 5907 Query 7229 AACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT-AGAAA--TCA 7285 || | || || | |||||||| || | ||| | |||| | ||||| || Sbjct 5906 AAAAGATCTATGTTTAACTCCTCAAACTTGGCTCTGGTCA---ATGTTTCAGAAAAGTCT 5850 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATG---GTTGTTTGTGCCGTCGAAGATAACGTT 7342 || | || || | ||||||||||| || |||| | ||||| | ||| Sbjct 5849 TTTCCATTGTGAAAGGCTTCAATTTCAATTCGAGTAGTTTT---CTGAGAAGAGAGTGTT 5793 Query 7343 CGCTTTGCG----CGCTCACACGCCGTTCGTAAACGACGAAGGGC----ACGCGGGTTAC 7394 ||||| || || | ||||| || | || | | || | | | ||| Sbjct 5792 CGCTTGGCTTTTTCGGCCTCACGCT-TTAATTTAC--CCATGGTCTTTAAATCT--TTA- 5739 Query 7395 CGGAAATATCTTTCTTATGTTTACGT-TTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTC 7453 | |||||| |||| ||| | | || | | || || || | || || | | Sbjct 5738 --GTAATATCAACGTTAT-TTTCCTTGTTGTATTTTTTAGCGAGATAATTAATGATACGC 5682 Query 7454 GAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATA 7513 || |||||||||||||| | || ||||| || || || | ||| ||||| | | Sbjct 5681 TGGTCAAAATCTTCACCACCAAGATGAGTATCACCGGCAGTGGAAAGGACCTCAAATACA 5622 Query 7514 CCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 || | |||||| | | || |||||||| || || ||||| || ||| | | | Sbjct 5621 CCACGATCAATGGAAAGTAGAGATACATCAAATGTTCCTCCACCTAGATCATATACAATA 5562 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | | | || | ||| ||| ||||| ||||||||||| ||||| ||||| |||||| Sbjct 5561 ATCTGTCTCTCTCCATCT--GTT-TTATCAAGACCGTACGCAATAGCTGCCGCAGTTGGT 5505 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 ||||| | |||||| || ||| |||||||| || ||| | |||||||| || |||||| Sbjct 5504 TCATTCACAATACGGAGTACGTTAAGGCCAGCTATGGTTCCGGCATCTTTAGTAGCTTGT 5445 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTT-CTTACC 7752 | || ||| |||||||| || || || ||||| || || | |||||||| ||| || Sbjct 5444 CTCTGATTATCATTAAAGTATGCAGGAACAGTTACAACTGCATGAGTGACTTTGCTTCCC 5385 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 || || || || || | |||||||||||| ||||| ||| | ||||| || |||| Sbjct 5384 AAG-TATGACTCAGCAACATCTTTCATTTTTCCAAGAATCATTGCAGAAATTTCCTCAG 5327 >seq552 Length=65077 Score = 199 bits (220), Expect = 5e-46 Identities = 366/536 (68%), Gaps = 3/536 (1%) Strand=Plus/Minus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 || |||||||| ||||| || || || | ||||||| ||||| |||| || || Sbjct 22271 TCTTCAAAACGCGCACGAGTTATTTGAGTGTTAAAATCAATTCCGTCAAATAATGAGTCG 22212 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 ||||| | |||||||||| | || | |||| |||||| |||||||| || || Sbjct 22211 ATTTCTAGATTTGTTTGTGCACCAGTTGAAAGAGTTCTCTTTGCACGCTCACATGCAGTA 22152 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 ||||| | ||||||||||| || | ||| || | ||||||||| ||||| || ||| Sbjct 22151 CGTAATCTTCGAAGGGCACGGGGATCACCTGATAAATCTTTCTTGTGTTTGCGAAGAAAT 22092 Query 7427 TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 |||| |||||| ||| || | | ||| ||||||| || || || || || ||| Sbjct 22091 TCTTTTCTGAAGTGCTCAAGCAGATTAGTATCAAAATCTTGCCCCCCTAAATGGGTGTCC 22032 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546 ||||| || ||||| ||| || | ||| || | ||||| | ||| || ||||| || Sbjct 22031 CCCGCAGTTGCTTTTACTGTGAACACACCACCCTGTATGTTGAGCAAAGAGACATCGAAA 21972 Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGT---CGTCTTTGTTCTTATCG 7603 |||||||| || || ||| |||| || || || | || | | ||| | | Sbjct 21971 GTACCACCTCCAAGATCATAAATAAGGACATTTCTTTCTTTACTGGATTTCCCAGCACCA 21912 Query 7604 AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCA 7663 ||||||||||| ||||| || || || || ||||| || || || ||| || ||||| Sbjct 21911 AGACCGTACGCTATAGCTGCGGCGGTGGGCTCATTGATGATGCGCAGAACATTTAGGCCT 21852 Query 7664 GCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACC 7723 ||||||| | || || || || || || || || ||| || ||||| || || || Sbjct 21851 GCAATAGCACCGGCGTCCTTTGTTGCCTGACGCTGATTATCATTGAAGTATGCAGGAACA 21792 Query 7724 GTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 || | || || | || || || || || || | ||| || | |||||||| Sbjct 21791 GTGATAACAGCTTTGGTAACCTTTTTCCCCAGTTTAACTTCAGCAACCTCTTTCAT 21736 >seq307 Length=22549 Score = 105 bits (116), Expect = 8e-18 Identities = 168/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 11449 TTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAAT 11508 || ||||| ||||| |||||||||||||| |||||||| ||| |||| ||| || | Sbjct 9081 TTGCCAATGGCATCGATTTCATCTATAAAAATAATACATGGTGTGTTTTTACGAGCTTCT 9140 Query 11509 TCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGA- 11567 | || | ||| || |||| | || || ||||| |||||||| || || || || Sbjct 9141 GCGAAAAGATCGCGAACTCGTGAGGCACCGACGCCAACAAACATCTCTACAAATTCAGAT 9200 Query 11568 CCCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGT 11627 || | |||||||| || || || || || || || |||| ||||||||||| Sbjct 9201 CCACTTACACTGAA-GAATGGTACTTGTGACTCGCCTGCCGTAGCTTTAGCTAAAAGTGT 9259 Query 11628 TTTACCTGTACCTGGTTTACCTGTTAATAAT-GCACCCCTTGGTATTTTAGCACCG 11682 ||| || || |||||| || | || ||| ||||| | ||||||||| |||||| Sbjct 9260 TTTCCCAGTTCCTGGTGGTCC-GGAAAGAATAGCACCACGTGGTATTTTGGCACCG 9314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635082386334000