Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq649 147 4e-30 seq1181 131 3e-25 seq2344 98.7 2e-15 >seq649 Length=19467 Score = 147 bits (162), Expect = 4e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || ||||| | ||||| || | ||| | || | ||||| || || ||||| Sbjct 4445 ATGCCTCCTCTTAGACGAAGCACTAAATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCT 4504 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| |||| ||| || | ||||||||| ||||| ||||||| |||||| || ||| Sbjct 4505 GATAAAGTTCGGCCATCCTCAAGTTGTTTTCCTGCAAATATTAATCGCTGTTGGTCCGGA 4564 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||||||||| |||||| |||| | || ||| || || |||||||| Sbjct 4565 GGAATTCCTTCTTTATCTTGAATTTTGCTTTTGACGTTATCAATGGTGTCAGAAGACTCG 4624 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336 ||||| ||||| ||||||||||| || Sbjct 4625 ACTTCGAGAGTAATAGTTTTACCGGT 4650 Score = 134 bits (148), Expect = 2e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||| | | ||||| |||| || | ||| | ||||| || ||| Sbjct 5000 ATTTGCATGCCACCACGAAGACGAAGGACCAAGTGGAGTGTCGATTCTTTTTGGATGTTA 5059 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || | |||| | || || | ||||||||| |||||||||| ||| |||||| Sbjct 5060 TAGTCAGAAAGTGTTCGACCGTCCTCAAGTTGTTTTCCAGCAAAAATTAGTCTTTGTTGA 5119 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| ||||||||||| ||||||||||| |||||| ||| || || || || Sbjct 5120 TCGGGAGGAATTCCTTCTTTGTCTTGTATTTTACTTTTTACATTGTCGATGGTGTCAGAC 5179 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGT 193336 ||||| || |||||||| || ||||| || || Sbjct 5180 GACTCGACCTCTAGAGTGATGGTTTTTCCAGT 5211 Score = 118 bits (130), Expect = 2e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||| |||||||| | |||| ||| || || || ||||| || ||||| |||||| Sbjct 5332 ATATTGTAGTCGGAAAGTGTTCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCTC 5391 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||| || || || || |||||||| || || |||||| |||||| ||| |||||| Sbjct 5392 TGTTGGTCTGGTGGGATGCCTTCTTTGTCCTGAATTTTGCTTTTTACATTGTCGATAGTA 5451 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGT 193336 || || || || ||||| || ||||||||||| || || Sbjct 5452 TCAGATGATTCGACTTCAAGGGTTATAGTTTTGCCAGT 5489 Score = 114 bits (126), Expect = 2e-20 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | ||| ||||| ||||| || ||||| ||||| || || || || |||||||| Sbjct 4291 ATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGGTGGAATACCTTCTTT 4350 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||| || || |||| | || || ||||| ||||| || ||||| |||||||| Sbjct 4351 ATCTTGGATCTTACTTTTGACGTTGTCTATTGTATCTGAAGATTCTACTTCAAGAGTTAT 4410 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || | ||||| |||||||| ||||| Sbjct 4411 TGTTTTCCCAGTCAATGTTTTGACAAATATCTGCAT 4446 >seq1181 Length=24886 Score = 131 bits (144), Expect = 3e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 |||||||| ||||| | |||| ||||| || || ||||| || || || | Sbjct 11297 CGAAGTACGAGATGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAATGTCCGGCCG 11238 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||||||||| |||||||| || | ||||| ||||| || || ||||| ||| Sbjct 11237 TCCTCGAGTTGTTTTCCCGCAAAAATCAAACGTTGTTGGTCAGGTGGAATGCCTTCCTTA 11178 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| ||||| | ||||| ||| || || || || ||||| || || || || ||| Sbjct 11177 TCTTGGATTTTTGATTTTACATTGTCGATGGTGTCCGATGACTCCACCTCAAGCGTAATA 11118 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || || ||||| || || |||||||| Sbjct 11117 GTTTTACCCGTGAGGGTTTTCACGAAAATTTGCAT 11083 >seq2344 Length=7468 Score = 98.7 bits (108), Expect = 2e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| || || || | |||| ||| || | ||||| || ||||| || || | Sbjct 4347 AATATTGTAATCAGAAAGAGTTCGTCCATCTTCAAGCTGTTTACCAGCAAATATCAAACG 4288 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||||||||||| || ||||| |||||||| || || || | ||| | ||| ||| || Sbjct 4287 TTGTTGATCAGGGGGGATTCCCTCTTTATCCTGGATCTTTGCTTTCACATTATCAATTGT 4228 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351 || || |||||||| |||| || |||||||| || ||||| || || || || Sbjct 4227 GTCAGAGGACTCAACCTCTAAGGTGATAGTTTTGCCAGTTAGGGTCTTGACGAA 4174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899582989932000