Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq649 131 3e-25 seq1181 102 1e-16 >seq649 Length=19467 Score = 131 bits (144), Expect = 3e-25 Identities = 142/186 (76%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 146055 ACAGGAAAAACAATTACTATTGATGTAGAA-CATAACGATACTATTCAAAATGTAAAAAA 146113 || || ||||| ||||| |||| ||||| ||| ||| || ||| | ||||| |||| Sbjct 4935 ACTGGTAAAACCATTACCCTTGAGGTAGAGTCATC-CGACACCATTGATAATGTGAAAAG 4877 Query 146114 TAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAA 146173 ||||||||| || ||||| ||||||||||||||||||||| | || ||||| || || Sbjct 4876 TAAAATACAGGACAAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAA 4817 Query 146174 ACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCA 146233 |||| | || ||| | |||| ||| | ||||| || || ||||||||||| || | || Sbjct 4816 ACAACTTGAGGATGGTCGAACATTATCTGATTACAACATTCAAAAAGAATCTACCCTTCA 4757 Query 146234 TTTAGT 146239 | |||| Sbjct 4756 TCTAGT 4751 Score = 122 bits (134), Expect = 1e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 146055 ACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAAT 146114 || |||||||| || ||| | || || || || || || | |||||||||| | Sbjct 5211 ACTGGAAAAACCATCACTCTAGAGGTCGAGTCGTCTGACACCATCGACAATGTAAAAAGT 5152 Query 146115 AAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAA 146174 ||||||||| |||||||| ||||| ||||||||||||||||| |||||||| || ||| Sbjct 5151 AAAATACAAGACAAAGAAGGAATTCCTCCCGATCAACAAAGACTAATTTTTGCTGGAAAA 5092 Query 146175 CAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCAT 146234 ||| | || || | |||| | | || ||||| || |||||||||||||| |||| Sbjct 5091 CAACTTGAGGACGGTCGAACACTTTCTGACTATAACATCCAAAAAGAATCGACACTCCAC 5032 Query 146235 TTAGT 146239 || || Sbjct 5031 TTGGT 5027 Score = 109 bits (120), Expect = 9e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 146055 ACAGGAAAAACAATTACTATTGATGTAGAA-CATAACGATACTATTCAAAATGTAAAAAA 146113 || || ||||| || || |||| || ||| ||| |||||||| | |||||||||| Sbjct 5489 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCT-GATACTATCGACAATGTAAAAAG 5431 Query 146114 TAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAA 146173 ||||| || ||||||||||| ||||| || ||||| ||| | ||||| || || || Sbjct 5430 CAAAATTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAAA 5371 Query 146174 ACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCA 146233 || || || ||| |||| | | || || ||||||||||||||||| ||| | || Sbjct 5370 GCAGTTGGAGGATGGCCGAACACTTTCCGACTACAATATACAAAAAGAATCCACTCTTCA 5311 Query 146234 TTTAGTATTACGATTAAGAGGAGG 146257 ||||| |||| ||| | || || Sbjct 5310 CTTAGTCCTACGTTTACGCGGTGG 5287 >seq1181 Length=24886 Score = 102 bits (112), Expect = 1e-16 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| ||| | ||||| | || || ||||| ||||| |||| || || ||| Sbjct 11084 TGCAAATTTTCGTGAAAACCCTCACGGGTAAAACTATTACGCTTGAGGTGGAGTCATCG- 11142 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || | ||||||||| ||||| ||| ||| |||||||||||||| || ||| Sbjct 11143 GACACCATCGACAATGTAAAATCAAAAATCCAAGATAAGGAAGGCATTCCACCTGACCAA 11202 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | | |||||||| || |||||| | || || | || || | || || || Sbjct 11203 CAACGTTTGATTTTTGCGGGAAAACAACTCGAGGACGGCCGGACATTGTCTGACTACAAC 11262 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTA 146240 || ||||||||||| ||| | ||| | ||| Sbjct 11263 ATCCAAAAAGAATCTACTCTTCATCTCGTA 11292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786103998042000