Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq649 96.9 8e-15 seq1181 84.2 5e-11 >seq649 Length=19467 Score = 96.9 bits (106), Expect = 8e-15 Identities = 131/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT--AAAGC 206251 || || ||||| || ||| | ||||| || ||||||||| | || || ||||| Sbjct 4650 ACCGGTAAAACTATTACTCTCGAAGTCGAGTCTTCTGACACCATTGATAACGTCAAAAGC 4591 Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311 |||| ||||||| |||||||||||| |||||| || || | || || || |||| Sbjct 4590 AAAA--TTCAAGATAAAGAAGGAATTCCTCCGGACCAACAGCGATTAATATTTGCAGGAA 4533 Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371 | || | || ||||| | ||||| | || |||||| |||||||||| || ||||||| Sbjct 4532 AACAACTTGAGGATGGCCGAACTTTATCAGACTACAACATCCAGAAAGAATCCACTCTTC 4473 Query 206372 A 206372 | Sbjct 4472 A 4472 Score = 84.2 bits (92), Expect = 5e-11 Identities = 129/182 (71%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAA--GC 206251 || || ||||| || || | ||||| ||| ||||| || |||| ||||| || Sbjct 5489 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCTGATACTATCGACAATGTAAAAAGC 5430 Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311 |||| |||| || |||||||| || || ||| || ||| | || ||||| |||| Sbjct 5429 AAAA--TTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAA 5372 Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371 |||||||||| ||||| | || | |||| ||||| | || ||||| || ||||||| Sbjct 5371 AGCAGTTGGAGGATGGCCGAACACTTTCCGACTACAATATACAAAAAGAATCCACTCTTC 5312 Query 206372 AC 206373 || Sbjct 5311 AC 5310 >seq1181 Length=24886 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| || || | || ||||| || ||||| |||| Sbjct 11098 AAAACCCTCACGGGTAAAACTATTACGCTTGAGGTGGAGTCATCGGACACCATCGACAAT 11157 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 ||||| ||| || ||||| || ||||| ||| || ||| ||| | | || || Sbjct 11158 GTAAAATCAAAAATCCAAGATAAGGAAGGCATTCCACCTGACCAACAACGTTTGATTTTT 11217 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||| || | || || || |||| ||| | || |||||| |||| ||||| ||| Sbjct 11218 GCGGGAAAACAACTCGAGGACGGCCGGACATTGTCTGACTACAACATCCAAAAAGAATCT 11277 Query 206365 ACTCTTCACCTTGT 206378 |||||||| || || Sbjct 11278 ACTCTTCATCTCGT 11291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181724647798350