Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq492 621 5e-173 seq388 197 2e-45 >seq492 Length=50397 Score = 621 bits (688), Expect = 5e-173 Identities = 1390/2066 (67%), Gaps = 51/2066 (2%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || |||||||| || | ||||| | | |||||||| |||||||| || ||||| | Sbjct 16262 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCAGTTTTTAAG 16321 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 |||| ||||||| |||||||||||||||| |||| | |||| || | Sbjct 16322 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 16381 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTT---TT 68550 ||||||||||| || || ||||| || || || || | ||| || ||||| | || Sbjct 16382 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 16441 Query 68551 ATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGA 68610 || | | || | ||| || ||||||| || || | | ||| || || ||||| Sbjct 16442 ATGGTGCGCTGT-GAG--ATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGA 16498 Query 68611 AGGCTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCA 68667 | | | |||| ||||| || || ||||| ||||| || ||| || || | |||| Sbjct 16499 ATATTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCA 16558 Query 68668 TTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCC 68727 ||| || | || | | || | || | ||||| || |||||||| || Sbjct 16559 GACCATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCT 16618 Query 68728 CCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTT 68787 || | ||| || | || | ||| |||||| ||||||||| || | | | |||||| | Sbjct 16619 CCTGCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAAT 16678 Query 68788 CCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGA 68847 || ||||||||| || ||| |||||||| || || || | ||| ||||| | ||| Sbjct 16679 CCAAGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGG 16738 Query 68848 CCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACA 68907 |||| | | |||| | | |||| | | ||||||||| | || | ||| ||| Sbjct 16739 CCATAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACG 16798 Query 68908 TTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAA 68967 ||| | ||||||||| || || | || || || | || || || || Sbjct 16799 CCCCACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTAT 16858 Query 68968 GGTCCTTCCTGTTCAGCTAGTTCACAACTT--GCCTCTAATGCACCGTAATAAATTGTTT 69025 | ||| | || |||| ||| ||| | || || | | ||| || |||| Sbjct 16859 GTACCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTT 16916 Query 69026 CGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAA 69085 | || |||| || ||||||| || ||| ||| || |||||||| | | ||| | Sbjct 16917 CAAAGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCA 16976 Query 69086 TAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAAC 69145 ||| ||||||| | || ||||| || | | | || |||| || | | | ||| | Sbjct 16977 AAAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCG-TAAATTGCTC 17035 Query 69146 TTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACT 69204 || | |||||| || | |||||| ||||||| ||| || |||||||| ||||| | ||| Sbjct 17036 TTACGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACT 17095 Query 69205 ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATC-----TAT-AACA 69258 || || | | || || | |||||| |||||||||| ||| ||| |||| Sbjct 17096 ACAACCTGACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACA 17155 Query 69259 AACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATAT 69318 | | || |||| ||||| | ||||||||| || || |||| | | || ||| Sbjct 17156 TAGGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTAT 17215 Query 69319 TGTATTATCTCTGTACATAGATTA---CTACATTTGATAGTCCCCAGATTTTGCTGATTA 69375 | | || || ||||| |||||| |||| ||||||||| ||||||| ||||| Sbjct 17216 TCAACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTG 17272 Query 69376 CTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 69435 |||||||| ||||| || || ||||| || ||||| || ||||||||||| | || | | Sbjct 17273 CTCTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCT 17332 Query 69436 TCGATAATAGATTTCCAAACGA------CCCTAGCATTTATTACGGTCTTGTAACGCTTC 69489 ||||| || || | ||| | || || | || | |||| ||| | |||| Sbjct 17333 TCGATTATTGAGTACCATAGCTTTTGTGCCATAATAGTTCT-ACGGCCTTT---CCCTTC 17388 Query 69490 TCTTTTTCATATTGTGTATATA--GCCGTTCGAATTCATCTCCCCAAACATCATCCAATC 69547 | | |||||| | | ||||| ||| || |||||||| || | |||||| | | | Sbjct 17389 T--TGTTCATACTTTTCATATAAAGCC--TCAAATTCATCGCCATACACATCAGCTAGAC 17444 Query 69548 CAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAA 69607 ||||||||||| || ||||||| | ||| || ||| | | ||||| ||||||| Sbjct 17445 CAGGACATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAA 17504 Query 69608 ATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCT 69666 | ||||| || |||||||| || ||| || ||||| | | | | |||||| || || Sbjct 17505 AGAGATCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCG 17563 Query 69667 GTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 69726 |||||| || ||||| ||||| | ||||| | |||||||| || | |||||| Sbjct 17564 TGATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATA 17623 Query 69727 GCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAG 69786 || | ||||||| || ||||| || || ||||| | ||||||||||| ||||| || Sbjct 17624 GCGAATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAG 17683 Query 69787 ACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCT 69846 |||| |||||||| | ||||||||| || || ||||||||||| | |||||| ||| Sbjct 17684 ACTCGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCT 17743 Query 69847 CTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 69906 | |||||||| | |||| || || || || || || ||||||| || | ||| Sbjct 17744 GTCGCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCG 17803 Query 69907 CAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAA 69966 ||| |||||| || || || || || || || ||||| ||| |||| | || | ||| Sbjct 17804 CAAGTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAG 17863 Query 69967 CAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTG 70026 || ||| | |||| ||| ||| || || ||||| ||||| || || || || Sbjct 17864 CATGAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTA 17923 Query 70027 AACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGA 70086 || |||| | || | ||||| || || || ||||| ||||| || || || ||| Sbjct 17924 AAGTATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGA 17983 Query 70087 ATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATT 70146 ||||| | ||||||||||| | |||||| || || || || || |||||| ||| | Sbjct 17984 ATTCCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGAGG 18043 Query 70147 TTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTT 70206 | || |||||| |||||||||| || || |||||||| | ||| |||||||| Sbjct 18044 CGAAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGA 18103 Query 70207 TCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATC---CATAACA 70263 || |||| || | ||||| || | | | | || || |||| | || ||| | | Sbjct 18104 TCATAAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACAT-AGA 18162 Query 70264 GTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCT 70323 | | | ||| || |||||| ||| |||||||| ||||| ||||| | | | | ||| Sbjct 18163 TTTGCT--GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCA 18220 Query 70324 TCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTG 70383 | || | | ||| ||||||||||| ||||||| ||| || | ||||| | Sbjct 18221 GAGACAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGT 18280 Query 70384 GCTGCTAGAATAGCATAGTCAGGATG 70409 ||||| |||||||| ||||| ||||| Sbjct 18281 GCTGCAAGAATAGCGTAGTCGGGATG 18306 >seq388 Length=15577 Score = 197 bits (218), Expect = 2e-45 Identities = 590/921 (64%), Gaps = 72/921 (8%) Strand=Plus/Minus Query 39310 TGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCC 39369 || ||| ||||| ||||| || ||||| || ||||| |||||||| ||||| || || Sbjct 9270 TGCCATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCC 9211 Query 39370 TTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAA 39429 |||| || |||||||||||||||||||| ||||| | | || ||| ||| | Sbjct 9210 AGCCAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATT 9151 Query 39430 TCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACA 39489 |||||| | | || ||||||||| ||||| ||||| ||||||| Sbjct 9150 TCCTAACGAGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGC 9091 Query 39490 ATTCATTCCTATGAGTTTAAC---TGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTC 39546 ||||| || |||| | | ||| || || || |||||||| |||| ||| || || Sbjct 9090 GTTCATGCC---GAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTC 9034 Query 39547 TACGGCCTCTGTTATTATCGATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGT 39604 ||||| | ||| || | || | || || | | ||| ||| |||||| Sbjct 9033 GACGGCTTGTGTGATAAC--ATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGT 8976 Query 39605 TTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTA 39664 ||| | | || || ||||| |||||||| || || | ||| | ||||||| Sbjct 8975 GAAAAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTA 8916 Query 39665 GAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT 39724 ||||| || || |||| ||| | || || || || | |||||| |||| |||||| || Sbjct 8915 GAAAAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAA 8856 Query 39725 CCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTA 39784 ||| || || || || || ||||| ||||| || ||||| | | ||| | | | Sbjct 8855 CCACTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGAC 8796 Query 39785 TCATTATGT---ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCA----- 39836 || || | | ||||| ||||| |||| || ||||| | |||||| | Sbjct 8795 TCTTTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATG 8736 Query 39837 -------------------------------------------TTGTTTCTATAGCATTA 39853 |||| || |||||||| Sbjct 8735 AATCGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTG 8676 Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913 || |||||| ||||| | | |||||| | || ||||| ||||| || ||| || Sbjct 8675 AAAAGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTT 8616 Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 || || ||||| ||||| ||| || |||||||| ||||| |||| || |||| ||| Sbjct 8615 TCAGAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATC 8556 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || || || | ||| | || | | |||||||| || || || || |||||| Sbjct 8555 TGCACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCA 8496 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTATT 40086 ||||| || | ||||| ||||| ||| |||||| ||| | ||||| Sbjct 8495 AAAAAGGCTAGCACATGAGATATAAAGTATCGTTCATC----ATCATTGAGACGGTTATT 8440 Query 40087 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGC 40146 ||| || | ||||||||| || | ||| | || ||||| |||||||| || ||||| || Sbjct 8439 CCAATCGTGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGC 8380 Query 40147 CTTTTTGTACATGTTCCATAT 40167 ||||||||||| | |||||| Sbjct 8379 TTTTTTGTACATATGCCATAT 8359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686854276614000