Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq388 147 2e-30 seq406 138 9e-28 >seq388 Length=15577 Score = 147 bits (162), Expect = 2e-30 Identities = 588/912 (64%), Gaps = 89/912 (10%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 |||||||| |||||||||||||| |||| || |||||||| || || || |||||||| Sbjct 8359 ATATGGCATATGTACAAAAAAGCCGAGGCATCTTTTTGGACTGCTGAGGAGATTGATTTG 8418 Query 43790 ACTAAAGACTTAGCAC-ATTGGATTG--CATTAAAACCACAA-GAAAAACATTTTATATC 43845 ||||||| | ||| |||||| | | | || | | ||| | | |||||||| Sbjct 8419 TCTAAAGATATC-CACGATTGGAATAACCGTCTCAATGATGATGAACGATACTTTATATC 8477 Query 43846 TTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCG 43905 | || | || |||||||| || |||||||| || |||||||| | || || Sbjct 8478 TCATGTGCTAGCCTTTTTTGCCGCCTCAGACGGGATTGTTAATGAAAACCTCGTCGAGCG 8537 Query 43906 GTTTGCGCAA-GAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCA 43964 |||| ||| ||||| || | || || || ||| |||||||| ||||||||| | Sbjct 8538 GTTTA-GCAGTGAAGTGCAGATTCCTGAGGCTAGATTCTTTTATGGATTTCAAATTATGA 8596 Query 43965 TAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGG-G 44023 | |||||||| || || |||| || ||| | || ||||| ||||| |||||| | Sbjct 8597 TGGAAAATATCCACTCTGAAACTTATTCGCTTTTAATCGATACTTACATAAAAGATCAAG 8656 Query 44024 CACGAGAAGC----------------ATCGA---------TTG----TT-------TAAT 44047 | | | || | ||||| || || || Sbjct 8657 CTCAAAAAACTTATCTTTTCAATGCTATCGAGACAAGTAATTCCCATTTCCCACACTATC 8716 Query 44048 GCGATAGA----AAC-------AGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTA 44096 |||||| ||| ||||||| ||||| | || | ||||||||| | Sbjct 8717 GCGATAATCGTTAACGATTCATAGTACCTTGTATTAAGAAAAAGTCTGACTGGGCCGTCC 8776 Query 44097 AATGGATA-AATTCAAATGATTCT---TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTG 44152 ||||| || |||| || || |||||| |||| ||||| || ||||| | ||| Sbjct 8777 GTTGGATTCAAGACAAA-GAGTCGACATTTGGACAACGTCTTGTAGCTTTTGCTGCAGTG 8835 Query 44153 GAAGGCATTTTCTTTTCAG--GATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTT 44210 || || || || |||||| | || ||||| |||| |||||||| ||||||||||| | Sbjct 8836 GAGGGAATATT--TTTCAGTGGTTCCTTTGCTTCCATTTTTTGGTTGAAGAAACGAGGGT 8893 Query 44211 TGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCG 44270 ||||| |||| | || ||||| || || | || ||||| |||||| |||| | Sbjct 8894 TGATGGCTGGCCTAACCTTTTCTAACGAACTTATTTCACGTGACGAAGGCCTACACACGG 8953 Query 44271 ATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAAT-- 44328 | |||||||| | | || | || | || | || | ||| |||| || | Sbjct 8954 ACTTTGCTTGTCTCCTCTTTTCACATTT----GAAGCACAGAC--CATCTAAG-CAGTCT 9006 Query 44329 -TACA-GATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTA 44386 | || ||| || | | | || || ||||||||||||||||| | || ||| | Sbjct 9007 GTTCAGGATGTTATCACACAAGCCGTCGAGATAGAACAAGAATTTCTAACTGAAGCGCTG 9066 Query 44387 CCTGTAAATTTAATAGGAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCA 44446 || | || | || ||||| | | ||||||| || || || |||| | ||||| Sbjct 9067 CCATGCGCTCTACTCGGCATGAACGCCACTCTGATGAAGCAGTACATCGAATTCGTTGCA 9126 Query 44447 GATCGTTTACT-------TTTGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCC 44499 ||||| | || || |||| || | ||| || | || |||| || Sbjct 9127 GATCGACTTCTCCTCTCGTTAGGAA----ATTCC---AAAGTATACAAAGTCAAAAATCC 9179 Query 44500 GTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGT 44559 |||||||| ||||||||||| || |||| || || || |||||||| |||||||| || Sbjct 9180 ATTTGATTTCATGGAAAATATCTCTTTGGCTGGGAAGACTAACTTTTTCGAAAAACGAGT 9239 Query 44560 TGGAGAATATCA 44571 || || ||||| Sbjct 9240 AGGTGACTATCA 9251 >seq406 Length=24912 Score = 138 bits (152), Expect = 9e-28 Identities = 288/426 (68%), Gaps = 11/426 (3%) Strand=Plus/Plus Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTG 19500 || |||||||| | |||||||||||||| || ||||| |||||||| | || || Sbjct 16373 AACGGTCCTGAGGTATTAAATAAATATGTTGGCCAATCAGAAGAAAACATTCGCAAGCTG 16432 Query 19501 TTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTAT 19559 || || || |||||| ||| | | || | |||| | ||||| | || ||||| Sbjct 16433 TTCGCAGATGCTGAAAAAG-AGTATAAGGAGAAGGGTGATGAAAGTGGCCTTCATATTAT 16491 Query 19560 AATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGT------TCTGGT---GTAAA 19610 || | |||||||| || ||| | ||||| ||||||||| ||||| | | Sbjct 16492 TATTTTTGATGAATTAGATGCAGTGTGTAAACAAAGAGGTAGCGGGGCTGGTGGCGGTAC 16551 Query 19611 TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACT 19670 ||| || ||||| |||||| |||||| | || || ||| | || || || ||||||| Sbjct 16552 TGGTGTTGGTGACAGTGTTGTAAATCAATTACTCTCTAAACTTGATGGCGTGGACCAACT 16611 Query 19671 GAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATT 19730 || |||||||| ||||||| |||||||| | || | || || || | | Sbjct 16612 TAACAATATTTTGCTTATTGGAATGACTAACCGTAAAGATATGATCGATGATGCTCTGCT 16671 Query 19731 ACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGT 19790 ||||| ||||| |||||| | | || |||||| | | || |||||| ||| || | Sbjct 16672 GCGACCAGGTCGCTTGGAAGTGCATATGGAAATTTCCCTTCCTGATGAACATGGCCGAGC 16731 Query 19791 GGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTTAAATGACGATGT 19850 | ||| | || || || ||||||| |||||| | || || || | || ||||| Sbjct 16732 ACAGATTCTTAAGATTCACACATCAAAAATGCGAGATAACAATGTTATGGATACAGATGT 16791 Query 19851 AGATCT 19856 | |||| Sbjct 16792 AAATCT 16797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397425240631750