Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq492 111 2e-19 >seq492 Length=50397 Score = 111 bits (122), Expect = 2e-19 Identities = 195/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || ||||| ||||| | || || || || || |||||||||||| ||| || | Sbjct 17423 TCGCCATACACATCAGCTAGACCAGGACATTCACAAGGGCACATCAGGGTCCATTCACCA 17482 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | || ||||| ||| ||| ||||| || || ||||| ||||| ||| || || || Sbjct 17483 TTTTTTTCAACTCTCTTCATAAAGAGATCAGGTATCCAAAGGGCATAGAATAGATCACGT 17542 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 ||| | || || | ||| || || || || ||||| || || | || |||||| Sbjct 17543 GCACGAACTTCTTCTTTGCCGTGATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCG 17602 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| ||||||| ||| || ||||| | ||| ||||| || || || | || Sbjct 17603 TGCCATGGCTCCAAATATATAGCGAATGCTCCCGGACGCTTATTACCACCTTGATCAACA 17662 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCC 79589 || | ||| || || ||||| ||||||||||| || || || || Sbjct 17663 TATCTGGCAGTATTATTGAAGACTCGGAGCATCGGTACAATACC 17706 Score = 107 bits (118), Expect = 2e-18 Identities = 194/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 19415 GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGC 19474 ||||| || || |||||||| |||||||| || || ||||| || || | || || || Sbjct 17706 GGTATTGTACCGATGCTCCGAGTCTTCAATAATACTGCCAGATATGTTGATCAAGGTGGT 17647 Query 19475 GGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 || || ||| | ||||| || || | |||||||||||||| || | | || Sbjct 17646 AATAAGCGTCCGGGAGCATTCGCTATATATTTGGAGCCATGGCACGCCGATATATTTGAG 17587 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 |||||||| || ||| || || || | || || | || || || || ||| Sbjct 17586 TTCCTCGACCTCCGCAAAAATCACGGCAAAGAAGAAGTTCGTGCACGTGATCTATTCTAT 17527 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTG 19654 ||| | ||||| || || || || ||| ||| ||||| || | | |||||| |||| Sbjct 17526 GCCCTTTGGATACCTGATCTCTTTATGAAGAGAGTTGAAAAAAATGGTGAATGGACCCTG 17467 Query 19655 ATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698 |||||||| ||||| ||||| ||| | || || || ||||| Sbjct 17466 ATGTGCCCTTGTGAATGTCCTGGTCTAGCTGATGTGTATGGCGA 17423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548481260844000