Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq492 699 0.0 seq388 197 2e-45 >seq492 Length=50397 Score = 699 bits (774), Expect = 0.0 Identities = 1402/2064 (68%), Gaps = 47/2064 (2%) Strand=Plus/Plus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || |||||||| |||| |||||| | | |||||||| |||||||| |||||||||| Sbjct 16262 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCAGTTTTTAAG 16321 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || | ||||||| |||||||| ||||| | |||| | | || || | Sbjct 16322 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 16381 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 ||||||||||| ||||| ||||| || || || || | |||||| ||||| | || Sbjct 16382 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 16441 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 ||||| || | || ||||||| |||||| | | | ||| || || |||||| Sbjct 16442 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 16501 Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 |||| |||| ||||| || || ||||| ||||| || ||| || || | |||| | Sbjct 16502 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 16561 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 || || | | ||| | | || | || | ||||| || |||||||| ||||| Sbjct 16562 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 16621 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | || || | || | ||| |||||| ||||||||| || | | | ||||| ||| Sbjct 16622 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 16681 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | ||||||| ||| || |||||||| || || || | ||| ||||| | || ||| Sbjct 16682 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 16741 Query 77259 TGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCC 77318 | | || |||| | | |||| | | | ||||||||| | |||| |||| ||| || Sbjct 16742 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 16801 Query 77319 CAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGT 77378 || | ||||||||| || || | || || || | || || || || | Sbjct 16802 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 16861 Query 77379 CCTTCTGTTTCAGCTAGTTCACAACTC--GCTTCCAATGCTCCGTAATAAATTGTTTCGA 77436 ||| | ||| |||| ||| ||| | | | ||| | | ||| || ||||| | Sbjct 16862 CCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 16919 Query 77437 AAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAA 77496 | |||| || ||||||| || ||| || | || || || | | ||| | || Sbjct 16920 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 16979 Query 77497 AGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTT 77556 | ||||||||| || |||||||| | | | || |||| || | |||| | Sbjct 16980 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATTGCTCTTAC 17039 Query 77557 TAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTA 77616 |||||| || | |||||| ||||||| || || |||||||| ||||| ||||| || | Sbjct 17040 GAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACAA 17099 Query 77617 CTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATC-----TAT-AACAAACA 77670 | | | || || | ||||| |||||||||| | ||| ||| |||| | Sbjct 17100 CCTGACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATAGG 17159 Query 77671 TGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTA 77730 | |||||||| ||||| | ||||||||| || || |||| | | |||| | Sbjct 17160 TCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTCAA 17219 Query 77731 TTATCTCGGTACATAGATTA---CTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCT 77787 || |||||||| |||||| |||| |||||| || ||||||| ||| ||||||| Sbjct 17220 CAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTGCTCT 17276 Query 77788 TTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGA 77847 ||||||| |||| || || || || ||||| || || || ||||| | |||| ||||| Sbjct 17277 TTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTCGA 17336 Query 77848 TAATAGATTTCCAGACGACTCTAGCTTTTAT--CATAG-ATTTGTATCGCCTCTCTCTT- 77903 | || || | ||| |||||||| | |||| | || || |||| || ||| Sbjct 17337 TTATTGAGTACCA--------TAGCTTTTGTGCCATAATAGTTCTACGGCCTTTCCCTTC 17388 Query 77904 ----TCATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCA 77957 ||||| || |||| |||| ||||||||||| || | |||||| | | ||| Sbjct 17389 TTGTTCATACTTTTCATATAAAGCC--TCAAATTCATCGCCATACACATCAGCTAGACCA 17446 Query 77958 GGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAG 78017 || |||||| |||||||||| | ||| ||||||| || | ||||| ||||||||| Sbjct 17447 GGACATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAG 17506 Query 78018 AGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTA 78077 |||||||||||||| || ||| |||||||| || | | | |||||| || || | Sbjct 17507 AGATCAGGTATCCAAAGGGCATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGA 17566 Query 78078 TTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCC 78137 || || || ||||| ||||| | ||||| | |||||||| || | |||||| || Sbjct 17567 TTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCG 17626 Query 78138 ATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACT 78197 | |||| || || |||||||| || ||||| | ||||||||| || ||||| | ||| Sbjct 17627 AATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACT 17686 Query 78198 CTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTT 78257 | | ||| || | |||||| || || ||||||||||||| | |||||| || | Sbjct 17687 CGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTC 17746 Query 78258 GCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAA 78317 |||||||| | ||| || || || || || || | ||||| || | ||||||| Sbjct 17747 GCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAA 17806 Query 78318 CGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAG 78377 |||||| ||||||||||| || || ||||| || || |||| | || | ||| || Sbjct 17807 GTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCAT 17866 Query 78378 CTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAAC 78437 ||| | |||| || ||| || || ||||| || || || ||||||||||| Sbjct 17867 GAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAG 17926 Query 78438 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATT 78497 |||| | || | |||||| || || || ||||| ||||| ||||| ||| |||||| Sbjct 17927 TATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATT 17986 Query 78498 CCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTC 78557 || || || |||||||| | |||||| || || | || || | |||| ||| | Sbjct 17987 CCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGA-GGCG 18045 Query 78558 AACAAG-TATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTC 78616 || ||| |||||| |||||| ||| || || |||||||| | ||| |||||||| || Sbjct 18046 AAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATC 18105 Query 78617 GTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATC---CATGACAGT 78673 |||| || | ||||| || | | ||| | || ||||| | || ||| | | | Sbjct 18106 ATAAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACAT-AGATT 18164 Query 78674 AGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTC 78733 | || || || |||||| | |||||||| ||||| ||||| | | | ||| Sbjct 18165 TGCTG--ATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGA 18222 Query 78734 CATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGC 78793 | || | | ||| ||||||||||| |||||||||||||| |||||||| | ||| Sbjct 18223 GACAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGC 18282 Query 78794 AGCTAGAATAGCATAATCAGGATG 78817 || |||||||| || || ||||| Sbjct 18283 TGCAAGAATAGCGTAGTCGGGATG 18306 >seq388 Length=15577 Score = 197 bits (218), Expect = 2e-45 Identities = 588/913 (64%), Gaps = 62/913 (7%) Strand=Plus/Minus Query 47837 CATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 47896 ||| ||||| |||||||| ||||| || ||||| |||||||| ||||| || || | Sbjct 9267 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 9208 Query 47897 CAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCC 47956 ||| || ||||||||||| |||||||||||||| | || || | ||| | ||| Sbjct 9207 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 9148 Query 47957 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATT 48016 ||| | |||| ||||||||||||||| || || ||||||| || Sbjct 9147 TAACGAGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGTT 9088 Query 48017 CATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGC 48076 ||| || | || ||| || || || || ||||| |||||||| || ||| || Sbjct 9087 CATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGC 9028 Query 48077 --ATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAAC 48134 | || ||| || || | | || | |||| | | ||||||| ||| Sbjct 9027 TTGTGTGATAACATC-CTG-AACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAG 8970 Query 48135 ATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAAT 48194 | | ||| ||||| || || || ||||| || | ||| | |||||||||||| Sbjct 8969 AGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAG 8910 Query 48195 GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAA 48254 || || || | ||| | || ||||| || | |||||| || | || || || ||| Sbjct 8909 GTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTG 8850 Query 48255 AAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG---CTTCG 48311 || ||||| || || || || ||||| || ||| | | ||| | | | ||| | Sbjct 8849 AAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTTTG 8790 Query 48312 TTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCA----------- 48360 | || ||||| || ||||| |||| ||| ||||| | |||||| | Sbjct 8789 TCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATCGT 8730 Query 48361 -------------------------------------TTGTTTCTATAGCATTAAAGAGA 48383 |||| || |||||||| || ||| Sbjct 8729 TAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAAGA 8670 Query 48384 -AAGtttttt-tCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGG 48441 ||||||||| ||| |||||| | ||||||||| |||||||| ||| |||| | Sbjct 8669 TAAGTTTTTTGAGCTTG--ATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCAG 8612 Query 48442 AGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTA 48501 |||| |||||||| || || |||||||| ||||| |||| || || | ||||| | Sbjct 8611 AGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCA 8552 Query 48502 CCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561 | || | | ||| || || | | || ||||| || || || || || ||||||| Sbjct 8551 CTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAA 8492 Query 48562 ATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCAT 48618 | |||| ||||| ||||| ||| ||| | | | | | |||||||| || | Sbjct 8491 AGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGT 8432 Query 48619 TGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTAT 48678 ||||||||| || | ||| | || ||||| |||||||| |||||||| |||||||| | Sbjct 8431 GGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGT 8372 Query 48679 ACATATTCCATAT 48691 |||||| |||||| Sbjct 8371 ACATATGCCATAT 8359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694613660664000