Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq492 637 7e-178 seq388 221 2e-52 >seq492 Length=50397 Score = 637 bits (706), Expect = 7e-178 Identities = 1396/2078 (67%), Gaps = 50/2078 (2%) Strand=Plus/Plus Query 75365 TTCTTATCCAACG-TGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACAT 75423 ||||| ||||| |||||||||| |||| ||||| | | |||||||| |||||||| Sbjct 16249 TTCTTGGTCAACGGTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACAT 16308 Query 75424 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACT 75483 |||||||||| || | ||||||| |||||||| ||||||| |||| | | Sbjct 16309 GCCAGTTTTTAAGCCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGT 16368 Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543 || || | ||||||||||| ||||| ||||| || || || || | |||||| Sbjct 16369 TGGGTCTTTCAAGTGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGC 16428 Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603 ||||| | || ||||| || | || ||||||| |||||| | | | ||| || Sbjct 16429 AGCCATCTGAATTATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAAT 16488 Query 75604 ATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTT 75660 || |||||| ||||| |||| ||||| || || ||||||||||| || ||| || Sbjct 16489 TTCGGCTGGAATATTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTT 16548 Query 75661 GATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAAT 75720 || | |||| ||| || | || | | || | || | ||||| ||||| Sbjct 16549 CATGTTATCAGACCATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAAT 16608 Query 75721 TTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGA 75780 |||||| ||||| | || || | || | ||| |||||| ||||||||| || | | | Sbjct 16609 TTGAAACTCTCCTGCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACA 16668 Query 75781 TTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACT 75840 ||||| ||| | ||||||| || || || ||||| || || || | ||| || Sbjct 16669 CTCATTAAATCCAAGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCT 16728 Query 75841 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 75900 ||| | || |||| | || |||| | | |||| | | | ||||||||| | |||| Sbjct 16729 ATTCCGAAGGCCATAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGT 16788 Query 75901 TGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATA 75960 ||| ||| |||| | ||||||||| || || | || || || | || Sbjct 16789 AGGTGTAACGCCCCACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTA 16848 Query 75961 TGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTC--GCCTCTAACGCACCGTAA 76018 || ||||| || || |||| |||| || |||| | || || | | | Sbjct 16849 AGTCTCGTATGTACCTAGTTTTTTGGCTAAGTC--AACTGAAGATGTTAGAGCTGCATGA 16906 Query 76019 TAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAA 76078 || || ||||| || |||| || || |||| || || || || || || || | Sbjct 16907 TATATGGTTTCAAAGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAG 16966 Query 76079 TGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTC 76138 | ||| | ||| |||||||||| || |||||||| | | | || |||| || | Sbjct 16967 CGCAAAGCCAAAAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGT 17026 Query 76139 TTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGA 76198 |||| | |||||| || | ||| || ||||||| ||| || |||||||| ||| Sbjct 17027 AAATTGCTCTTACGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGA 17086 Query 76199 TTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAAT---TTTCCATCT 76255 || || || || || | | || || | |||||| |||||||||| || || || Sbjct 17087 TTCCTAACTACAACCTGACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCT 17146 Query 76256 ATCACAAACATATTAAG----AGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGC 76311 | | |||||| | ||||| ||||| | ||||||||| || || |||| | Sbjct 17147 GT-ATTAACATAGGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGG 17205 Query 76312 ATTGGCATATTGTATTATCTCCGTGCATAGATTA---CTACACTTGATAGTTCCAAGATT 76368 | | |||| | || || || || |||||| |||| |||||| || ||||| Sbjct 17206 AGATGAGTATTCAACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATT 17262 Query 76369 TTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTC 76428 || ||| ||||||||||| ||||||| || || || || | ||| || || |||||||| Sbjct 17263 TTTTTGATTGCTCTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTC 17322 Query 76429 AATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTT-----ATTATAGATTTG 76483 | |||| |||||| || || | ||| |||||||| || |||| || Sbjct 17323 TGTTTGTGCTTCGATTATTGAGTACCA--------TAGCTTTTGTGCCATAATAG--TTC 17372 Query 76484 TATCGCTTCTCTCTT-----TCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAA 76538 || || | || ||| ||||| | | |||||| ||||||||||| || | | Sbjct 17373 TACGGCCTTTCCCTTCTTGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACA 17432 Query 76539 CATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAA 76598 ||||| | | ||||||||||||| || ||||||| | ||| ||||||| || | || Sbjct 17433 CATCAGCTAGACCAGGACATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAA 17492 Query 76599 CCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTT 76658 | | ||||||||||||||||||||||| || ||| |||||||| || | | | || Sbjct 17493 CTCTCTTCATAAAGAGATCAGGTATCCAAAGGGCATAGAATAGATCACGTGCACGAACTT 17552 Query 76659 CTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTT 76718 |||| || || ||| || || || |||||||| | ||||| | |||||||| | Sbjct 17553 CTTCTTTGCCGTGATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCT 17612 Query 76719 CTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAG 76778 | | |||||| || | | ||||| || |||||||| || ||||| | ||||||||||| Sbjct 17613 CCAAATATATAGCGAATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAG 17672 Query 76779 TGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAA 76838 | ||||| | |||| | ||| || | ||| || || || | ||||||||||| | | Sbjct 17673 TATTATTGAAGACTCGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGA 17732 Query 76839 TATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAG 76898 ||||| || || ||||| | |||| || ||| || || || || |||||| Sbjct 17733 TATAAGCACCTGTCGCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAG 17792 Query 76899 AGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGT 76958 | || | ||| || |||||| || || ||||| || || |||||||| || |||| | Sbjct 17793 AAATCATAGCGCAAGTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATAT 17852 Query 76959 TAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAG 77018 || | ||| || ||| | |||| || ||| || || ||| | ||||| | Sbjct 17853 CAATTAAAAAGCATGAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGG 17912 Query 77019 ATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATAT 77078 | ||||| || || |||| | || | |||||| || || || ||| | | ||| || | Sbjct 17913 AAGCATGCGTAAAGTATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGT 17972 Query 77079 CCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCT 77138 | ||| |||||||| |||||||||||||| | |||||| || || || || ||| | | Sbjct 17973 CATCTTGGTGAATTCCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTT 18032 Query 77139 TATTATTTATTTTCAACAAG-TATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 77197 ||| ||| | || ||| |||||| |||||| ||| || || |||||||| | ||| Sbjct 18033 TATCATTGA-GGCGAAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAA 18091 Query 77198 GAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATA 77257 |||||||| || |||| || | ||||| || | | | || || ||||| | Sbjct 18092 TTAAAGTCTCGATCATAAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTT 18151 Query 77258 TC---CATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAG 77314 || ||| | | | | | || ||||||||| | | |||||||| ||||| ||||| Sbjct 18152 TCGTACAT-AGATTTGCTG--ATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAA 18208 Query 77315 TTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGAT 77374 | | | || | || | ||| ||||||||||| ||||||||||| || Sbjct 18209 TGGTAGAGATCAGAGACAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAA 18268 Query 77375 ACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 || ||||| | || || ||||| || ||||| ||||| Sbjct 18269 ACAGCTATGCGTGCTGCAAGAATAGCGTAGTCGGGATG 18306 >seq388 Length=15577 Score = 221 bits (244), Expect = 2e-52 Identities = 594/915 (65%), Gaps = 60/915 (7%) Strand=Plus/Minus Query 46323 TGACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCC 46382 || ||| ||||| ||||| || |||||||| ||||| |||||||| ||||| || || Sbjct 9270 TGCCATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCC 9211 Query 46383 TTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAA 46442 |||| || ||||||||||| |||||||| ||||| | || || || | ||| | Sbjct 9210 AGCCAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATT 9151 Query 46443 TCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACA 46502 |||||| | |||| ||||||||||||||| || ||| ||||||| Sbjct 9150 TCCTAACGAGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGC 9091 Query 46503 ATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGAC 46562 ||||| || | || | || || || || || ||||| |||||||| || ||| Sbjct 9090 GTTCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGAC 9031 Query 46563 AGC--ATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTA 46620 || | |||| ||| || || | | || | |||| ||| |||||||| | Sbjct 9030 GGCTTGTGTGATAACATC-CTG-AACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAA 8973 Query 46621 AACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAA 46680 || | | ||| ||||| || || |||||||| || | ||| | |||||||||| Sbjct 8972 AAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAA 8913 Query 46681 AATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCA 46740 || || || |||| ||| | || || || || | |||||| || | || || || ||| Sbjct 8912 AAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCA 8853 Query 46741 GAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCA 46800 || ||||| || || || || || || || ||||| | | ||| | | | || Sbjct 8852 CTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCT 8793 Query 46801 TT---ATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCA-------- 46849 || |||||||| | ||||| |||| ||||||||| | |||||| | Sbjct 8792 TTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAAT 8733 Query 46850 ----------------------------------------TTGTTTCTATAGCATTAAAG 46869 |||| || |||||||| || Sbjct 8732 CGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAA 8673 Query 46870 AGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCT 46929 ||| | |||||| | | |||||| | || ||||| |||||||| ||| |||| Sbjct 8672 AGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCA 8613 Query 46930 GAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGT 46989 || || || ||||| || || |||||||| ||||| |||| || |||| |||||| Sbjct 8612 GAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGC 8553 Query 46990 ACCTCTGTACAAAATCGTTCAGAC-AAATTCTCATTCACTATTCCATCACTAGCAGCAAA 47048 || || | | ||| || || ||| | || ||||| || || || || || ||||| Sbjct 8552 ACTTCACTGCTAAACCGCTC-GACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAA 8494 Query 47049 AAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCCAGTC 47105 ||| || | ||||| ||||| ||| |||||| | | | | |||||||| || Sbjct 8493 AAAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATC 8434 Query 47106 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTT 47165 | ||||||||| || | ||| | || ||||| ||||| || || ||||| |||||||| Sbjct 8433 GTGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTT 8374 Query 47166 ATACATATTCCATAT 47180 ||||||| |||||| Sbjct 8373 GTACATATGCCATAT 8359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712877810832000