Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000208805.1_202011-02-23] 35,300 sequences; 69,261,028 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq27947 212 6e-50 seq32370 105 6e-18 seq18467 89.7 5e-13 >seq27947 Length=2872 Score = 212 bits (234), Expect = 6e-50 Identities = 542/820 (66%), Gaps = 4/820 (0%) Strand=Plus/Minus Query 37792 TGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATT 37851 ||||| ||| || || |||| |||||| || || ||| |||| || || ||| || Sbjct 2735 TGATTACTTTTCTTGTTGCAAGCATCTTTGTAAAGCATAAACGGAGTACCGGTTTCAGTT 2676 Query 37852 TGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTAAtttttttC 37911 || || || | || || | ||||| || ||| ||| | | || | ||| | Sbjct 2675 TGTGCTTCAACTATCGAGTACCATAGCTTTTGTGCCATAATGGTT-CTGCGACCTTTACC 2617 Query 37912 TTTGT-TTCGTA-TTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATC 37969 || | ||| || |||| |||||| | ||| |||| || | ||||| ||| | Sbjct 2616 TTCTTGTTCATACTTCTC-ATATAAAGCCTCAAATTCATCACCATAAACATCAGCTAAAC 2558 Query 37970 CTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAA 38029 | |||||||| ||||| ||||| |||| |||||| ||| |||||| || | | ||||| Sbjct 2557 CAGGACATTCACATGGGCACATAAGAGTCCATTCCCCATTTTTTTCAACTCTCTTCATAA 2498 Query 38030 ATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTA 38089 | | |||||||| |||||| ||| |||| ||| | | |||||| || || Sbjct 2497 AAAGATCAGGTATCCATAAGGCATAGAATAGATCACGAGCGCGGACTTCTTCTTTACCAT 2438 Query 38090 CATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCG 38149 |||||| | | ||||| || ||||| || || |||||||| |||| || || | Sbjct 2437 GATTCTTCCGGAGATCAAGAAATTCAAATATGTCTGCATGCCATGGCTCTAAGTATATAG 2378 Query 38150 ACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATA 38209 | || ||||| | |||| || || || | || |||||| | || || ||| | | Sbjct 2377 CGAAGGCACCTGGACGCTTATTGCCACCTTGGTCAACGTATCTAGCGGTATTGTTAAAGA 2318 Query 38210 TTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCT 38269 || | ||| || || || ||||| || || || || | || | ||||| | || Sbjct 2317 CTCGAAGCATTGGCACAATTCCATTGGAGTTTCCATTCGTTCCAGCGATATAGGCGCCTG 2258 Query 38270 TAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGC 38329 | || || ||| | ||| | || || ||||| |||| ||| ||||| | |||| Sbjct 2257 TCGCACGGATACGATGTATATTTAGACCAATACCACCGGCATTTTTGGATATCATTGCGC 2198 Query 38330 ATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAAC 38389 | |||||| ||||| | || || || ||||| || ||||| || | || ||||| Sbjct 2197 ACGTTTTTAAAGTATCGTAGATTCCATCAATACTATCCTCCTTCATGTCAATTAGAAAAC 2138 Query 38390 AACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGA 38449 | ||| | || | ||| ||||| || |||||||||||| |||||||| | | Sbjct 2137 ATGAAGAAAGCTGTGATTGTGGGGTTCCAGCAGCAAATAATGTAGGCGATGCATGCGTAA 2078 Query 38450 ACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAA 38509 | |||| | |||| | |||||||| ||||| || || || ||| | ||||| Sbjct 2077 AATATTTATTGGACATCAAGTTATATGTCTCTATAGCAGATTCAATGTCATCTTGGTGAA 2018 Query 38510 TACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTT 38569 | || | || || | ||||| ||||||||| || | || | || |||| ||| | Sbjct 2017 TCCCGACAGCAACACGCATTATCATATGTTGGGGCCGCTCCACAATCTTATCATTGAGCC 1958 Query 38570 TAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATA 38609 ||| ||||| ||| |||| | || || | |||||||| Sbjct 1957 GAAGAAGATATGATCTTTCCAGCGTCTTGAAGCCAAAATA 1918 >seq32370 Length=2278 Score = 105 bits (116), Expect = 6e-18 Identities = 300/456 (66%), Gaps = 10/456 (2%) Strand=Plus/Plus Query 11338 CTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATA 11397 ||||||||| || | ||| || |||||| ||||| ||||| || | | || || | Sbjct 565 CTTTTGATAATCGCCAACACGCTTTTCGAAGAAATTTGTCTTCCCAGCCAAGGAGATGTT 624 Query 11398 CTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAA 11457 ||||| ||| || |||||| | ||| | || ||| | ||||| | | Sbjct 625 TTCCATGAAGTCGAACGGATTAGTAGCCTTGTAAACCTTTGGATTTCCTAATGATAGCAG 684 Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAG 11517 |||| |||||| || ||||| || ||||| ||||| |||||||||| | || Sbjct 685 CAATCGATCTGCAACAAATTCGATGTACTGCTTCATTAGGGTGGAATTCATACCAAGTAG 744 Query 11518 ATC-CACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTA 11576 | || | ||| ||| | || || ||||| | |||||| | || || | | || Sbjct 745 TGCACAAGGTAAT-GCATCAGTTAAGAACTCTTGTTCTATTTCTACTGCTTGCGT---TA 800 Query 11577 TCGACGTTATAA----CTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACAC 11632 || |||| | | ||| || |||||| || |||||| || | | || Sbjct 801 TC-ACGTCTTGAACGGCTTGTTTTGATGGTCTGTGCTTCAAATGTGAGAAGAGAAGGCAA 859 Query 11633 GCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCG 11692 ||||| || |||| |||||| || | |||| |||||| ||||| ||||| || Sbjct 860 GCAAAGTCCGTGTGTAGACCTTCATCACGTGAAATTAATTCATTTGAAAACGTTAACCCA 919 Query 11693 GGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATT 11752 | ||| | ||||||||| || | ||| || || | ||| ||||| ||| || ||||| Sbjct 920 GCCATAAGTCCTCGTTTCTTCAGCCAGAAAATTGAAGCGAATGATCCACTGAAAAATATC 979 Query 11753 CCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCA 11788 ||||| ||||||||||| || || | | || |||| Sbjct 980 CCCTCGACAGCTGCAAAAGCCACAAGACGTTGTCCA 1015 Score = 89.7 bits (98), Expect = 5e-13 Identities = 224/336 (67%), Gaps = 7/336 (2%) Strand=Plus/Plus Query 11850 TTGTTTCTATAGCGTTAAATAAATGCATTTTTTCT-ATATTAT-CTCTTACATATGTATC 11907 ||||||| || || ||||| | | | |||||| | ||| | || | | ||| ||||| Sbjct 1126 TTGTTTCAATGGCATTAAAGAGGT--AGGTTTTCTGAGATTGTTCTTTGATATAGGTATC 1183 Query 11908 TATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAA 11967 || || | || | || || |||||||||||||| ||| || |||||||| || Sbjct 1184 GATCAACAGGGAGTAAGTCTCAGAGTGAATATTTTCCATCATTATCTGGAATCCATAAAA 1243 Query 11968 ACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTAC 12027 ||||||| || | | |||||| || | || | ||| | | |||||| || || Sbjct 1244 GAATCGTGCTTCAGGAATCTGTACTTCGCTACTGAAGCGTTCGACAAGATTCTCGTTGAC 1303 Query 12028 AATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTT 12087 ||| || || | ||| |||||||| |||| || |||||| || || || | Sbjct 1304 AATTCCGTCTGATGCTGCGAAAAATGCAAGTACGTGAGATATAAAATAACGCTCATCATC 1363 Query 12088 AGTTAAT---TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCA 12144 | | | | |||| ||| || | || |||||| || | ||| | |||||| | ||||| Sbjct 1364 ATTCAGTCTGTTATTCCAGTCGTGTAGATCTTTGGAAAGATCAATTTCTTCTGCAGTCCA 1423 Query 12145 AAAACTTGCCACTGATTGTTTATACATTTTCCAGAT 12180 ||| |||| | | | || ||||||| ||| || Sbjct 1424 AAAGGATGCCTCGGCCTTCTTGTACATTTGCCATAT 1459 >seq18467 Length=1410 Score = 89.7 bits (98), Expect = 5e-13 Identities = 459/722 (64%), Gaps = 34/722 (5%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 ||||| ||||| | |||||| ||||| | | || | | ||||||||| || || Sbjct 860 TCAACAGTGAACTGAATAGGAGCAGATGCAGCCATAGTCCGTAAATAATACATGCCGGTC 801 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATG-TAGGATT 36908 |||| |||| | |||| ||| ||| |||||||| || | ||| | ||| | |||| Sbjct 800 TTTAAGCCCAGTTTCCAGCCGGCAAAGTGCATACTTGTAATTTTGTCCCATGGTTGGATC 741 Query 36909 ATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCAT 36968 | | | || ||||||| || ||||| ||||| ||||| | || || ||||| Sbjct 740 CTTCAAGTGGATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCAT 681 Query 36969 TTCTAAAATACATTTT----TGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATAT 37024 || || || || | || || || ||||| || |||||||| | ||| | | Sbjct 680 --CTGAATTA--TTGTACGCTGTGAGATTTCCCAGACAGTTTTATACAGAGCTTTGGTTT 625 Query 37025 TATCTGGTAAATC---TAAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTA 37081 | || | || || || || ||||| ||| || | | ||| || || | Sbjct 624 CGGCAGGGATATTCGATATATTCTGTATAGAGCCACCATCGGAGATAATACGGTTTTTCA 565 Query 37082 TGTCATTATTCCACAT----ATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACA 37137 | | || ||||| || ||||| || ||| | | || ||||||||| Sbjct 564 TATTATCCGACCACAAGCCCATGTCTACC----AGGTCTTTGAGAAGCCAGGGATTTACA 509 Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 | ||||| ||||||| || || | | | ||||| ||| ||||||||||||| Sbjct 508 ATTTGAAACTCTCCAGCCAAAACACGACGGGAGTATATGTTGGAGGTATATGGTTCAAAA 449 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 |||||||| | | |||||| || |||||| ||||| || |||| || | Sbjct 448 CACTCATTAAATCCAAGAATTTGACTAGTGCTTGCAGTCGGCATAGGAGCTACAAGCAAA 389 Query 37258 CTATTTCTCAATCCATGTGTATTAATTCTC-TTTTTTAGTTCATTCCAATCCCATAAATC 37316 ||||| | | || | | || | |||| ||||| || ||| |||||||| || Sbjct 388 CTATTACGAAGCCCGTACATTTTGA-TCTCAGCTTTTAAAGAATCCCAGTCCCATAAGTC 330 Query 37317 TGTTGGGTTCTTTAA----CCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAAT 37372 ||| || | ||| ||||||||||||||| || ||||| || ||||| Sbjct 329 TGTGGG----TGTAACACCCCACATATCATATTGAAGCTCGCCTTTCGAGGCGGGAGAGC 274 Query 37373 CGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACT--AGATTCTAGTGC 37430 | | || |||||||||| || ||||||| | | ||||| || || || Sbjct 273 CCTCGTAAGTCTCATAAGTGCCCAGTTTTTTAGCCAAGT--CAACTGATGAGGTTAAGGC 216 Query 37431 GGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAA 37490 |||| |||||| ||||| || || || |||| | |||||| |||| | ||||| Sbjct 215 AGCATGATATATAGTTTCAAAGATCTGCTTATTGAGATGTTTTGCCTCTTGGGAGTCGAA 156 Query 37491 TG 37492 || Sbjct 155 TG 154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468318063432000