Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000208805.1_202011-02-23] 35,300 sequences; 69,261,028 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq32863 120 2e-22 seq34573 82.4 6e-11 >seq32863 Length=2297 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||||||||| | | | || |||||||| || || |||||||| |||||||| || Sbjct 1383 TGCCACCTCTGAGACGAAGTACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAT 1324 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 |||| | | | | ||||| | || || || || ||||||| | |||||| || || Sbjct 1323 TTAGTGTGCGCCCATCTTCAAGCTGCTTTCCCGCAAATATCAATCTTTGTTGATCCGGTG 1264 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 | || |||||||| || ||||| |||||||| | ||||| || ||| ||||| Sbjct 1263 GGATGCCTTCTTTATCCTGGATTTTACTCTTTACGTTGTCTATTGTGTCGGATGATTCTA 1204 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | |||| || || || || || || | ||||| |||||||||||||| Sbjct 1203 CCTCTAGTGTTATTGTCTTGCCGGTTAAGGTTTTGACAAAAATTTGCAT 1155 Score = 89.7 bits (98), Expect = 4e-13 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 |||||||| || |||||||| || |||||||| || ||| | ||||||||||| Sbjct 1129 TGAAGGGTTGATTCTTTTTGAATATTGTAATCAGATAAGGTTCGGCCATCTTCTAATTGC 1070 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || ||| | || | ||||| ||||| ||||||||| ||||| || ||| ||| Sbjct 1069 TTTCCCGCGAAAATTAGTCGTTGCTGGTCCGGTGGAATTCCCTCTTTATCTTGAATCTTG 1010 Query 15281 CTCTTTACAATTTCTATGGTATC 15303 || ||||| | || || ||||| Sbjct 1009 CTTTTTACRTTGTCAATAGTATC 987 Score = 87.8 bits (96), Expect = 1e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 |||||| || || || || |||||||| ||||| || ||| || | | | ||||| Sbjct 846 AACTAAGTGCAGAGTAGATTCTTTTTGGATGTTATAGTCGGAAAGTGTGCGTCCATCTTC 787 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | |||||| ||||| | ||||| | ||||||||| ||| || ||||| || || Sbjct 786 AAGTTGTTTACCAGCAAAGATCAATCTTTGTTGGTCCGGTGGGATGCCTTCCTTATCTTG 727 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || ||||| ||||| | || || || ||| | || || || | |||||||||||| Sbjct 726 GATCTTGCTTTTTACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGGGTAATGGTTTT 667 Query 15334 ACCTGT 15339 ||| || Sbjct 666 ACCAGT 661 >seq34573 Length=3214 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/205 (69%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||||||||| || |||||||| ||||||||||| || | | | || || | || Sbjct 1569 ATGAAGGGTTGATTCTTTTTGGATGTTGTAATCAGATAAGGTGCGGCCATCCTCAAGCTG 1628 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || || | ||||||||||||||||| ||||| || ||||| || ||||| Sbjct 1629 TTTACCCGCAAAAATCAAACGTTGTTGGTCAGGGGGAATACCCTCTTTATCTTGGATTTT 1688 Query 15280 GCTCTTT-ACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTG 15338 ||| ||| | || || || || ||| || || | ||||| || ||||| | Sbjct 1689 TTGATTTGACATTATCGATAGTGTCTGATGATTCCACCTCAAGTGTAATAGTCTTACCCG 1748 Query 15339 TCAGAGTTTTTACAAAAATTTGCAT 15363 | || || || || ||||||||||| Sbjct 1749 TGAGGGTCTTCACGAAAATTTGCAT 1773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362023383717300