Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000208805.1_202011-02-23] 35,300 sequences; 69,261,028 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq34573 125 6e-24 seq27687 109 5e-19 seq32863 107 2e-18 >seq34573 Length=3214 Score = 125 bits (138), Expect = 6e-24 Identities = 158/216 (73%), Gaps = 7/216 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | || ||||| | || ||| | || ||||| || || Sbjct 1773 ATGCAAATTTTCGTGAAGACCCTCACGGGTAAGACTATTACACTTGAGGTGGAATCATCA 1714 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||||| |||| || ||||||||| || ||||| || ||||| ||||| Sbjct 1713 GACACTATCGATAATGTCA---AATCAAAAAATCCAAGATAAAGAGGGTATTCCCCCTGA 1657 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| || | |||||||| || ||||| | || |||| ||||| | ||||| Sbjct 1656 CCAACAACGTTTGATTTTTGCGGGTAAACAGCTTGAGGATGGCCGCACCTTATCTGATTA 1597 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || ||||||||||| || || ||| | || || Sbjct 1596 CAACATCCAAAAAGAATCAACCCTTCATCTCGTACT 1561 >seq27687 Length=2946 Score = 109 bits (120), Expect = 5e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| || || || ||| | |||||| | || || ||||| || || |||||| Sbjct 2137 TTCGTCAAGACCTTAACGGGCAAAACAATCACACTTGAGGTCGAGTCCTCCGATACTATC 2078 Query 25068 GAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || |||| || || | ||| ||||| ||||| ||||| || ||||||||||| | Sbjct 2077 GATAATGTGAAAGCCAAGATTCAA-GACAAGGAAGGAATTCCTCCGGACCAACAGCGATT 2019 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 ||||| || ||||||||| | ||||||| || || | ||||| ||||||||||| Sbjct 2018 GATTTTCGCTGGCAAACAACTCGAAGATGGGCGTACGCTTTCTGATTATAATATTCAAAA 1959 Query 25187 AG 25188 || Sbjct 1958 AG 1957 >seq32863 Length=2297 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| || || || ||||| || | || ||| | || || || || || Sbjct 1154 AATGCAAATTTTTGTCAAAACCTTAACCGGCAAGACAATAACACTAGAGGTAGAATCATC 1213 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| |||||| || |||||||| || ||||| || || Sbjct 1214 CGACACAATAGACAACGTAAAGAGTAAAATCCAGGATAAAGAAGGCATCCCACCGGATCA 1273 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | || ||||| || || || | ||||||| ||||| | || ||||| Sbjct 1274 ACAAAGATTGATATTTGCGGGAAAGCAGCTTGAAGATGGGCGCACACTAAATGACTACAA 1333 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 |||||||||||||| || || ||||| || || | || ||||| || || || Sbjct 1334 CATTCAAAAAGAATCAACTCTTCATTTGGTACTTCGTCTCAGAGGTGGCAAGTA 1387 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/188 (72%), Gaps = 8/188 (4%) Strand=Plus/Plus Query 25044 GAAGTGGAGTCGTCTGACACTATCGAGTCACTG----AAGCAAAAAATCACTGACAAAGA 25099 || || ||||| ||||| ||||| || || | |||||| | ||| || ||||| Sbjct 972 GAGGTCGAGTCATCTGATACTATTGA--CAAYGTAAAAAGCAAGAT-TCAA-GATAAAGA 1027 Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 || |||||||| ||||| || || | ||||| || || || ||||||||||||| || Sbjct 1028 GGGAATTCCACCGGACCAGCAACGACTAATTTTCGCGGGAAAGCAATTAGAAGATGGCCG 1087 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAG 25219 || | ||||||||||||||||||||||| || || || | || || | ||| | Sbjct 1088 AACCTTATCTGATTACAATATTCAAAAAGAATCAACCCTTCACCTGGTTCTTCGTCTACG 1147 Query 25220 AGGAGGAA 25227 ||||||| Sbjct 1148 GGGAGGAA 1155 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAA 25082 || |||||| |||| || | || || ||||| || ||||||||||| || | | || Sbjct 661 ACTGGTAAAACCATTACCCTTGAGGTCGAGTCTTCCGACACTATCGA--CAACGTAAAAA 718 Query 25083 --AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140 || ||| || || ||||| || ||||| |||||||| | | || ||||| || | Sbjct 719 GCAAGATCCAAGATAAGGAAGGCATCCCACCGGACCAACAAAGATTGATCTTTGCTGGTA 778 Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200 ||||| | ||||||| ||||| | ||| || || || ||||||||||| || || | Sbjct 779 AACAACTTGAAGATGGACGCACACTTTCCGACTATAACATCCAAAAAGAATCTACTCTGC 838 Query 25201 ATTTAGTGCT 25210 | ||||| || Sbjct 839 ACTTAGTTCT 848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433141574169500