Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000208805.1_202011-02-23] 35,300 sequences; 69,261,028 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq27947 385 5e-102 seq32370 174 2e-38 >seq27947 Length=2872 Score = 385 bits (426), Expect = 5e-102 Identities = 657/950 (69%), Gaps = 8/950 (1%) Strand=Plus/Minus Query 47877 AGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATT 47936 ||||||| |||||| | ||| || |||||||| |||| |||| | |||| | |||| Sbjct 2837 AGTGCTAGAGATGCCAAATTGCACACAGCTACTTCATCTGGAGATGAGTATTCAACTATT 2778 Query 47937 TCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTA 47996 || | || || ||| | |||||| || | |||| |||||| | ||||| Sbjct 2777 TCGGTGCAAAGGTTAGAGCTGCGGATAGTCCCGAGGTTTTTCTGATTACTTTTCTTGTTG 2718 Query 47997 CATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGAT 48056 || || || |||||||||||||| || || || ||||| | || | ||||| || || Sbjct 2717 CAAGCATCTTTGTAAAGCATAAACGGAGTACCGGTTTCAGTTTGTGCTTCAACTATCGAG 2658 Query 48057 TTCCAAACAGTCCTAGCCTTTATAACAGCTCT---AGCTTTATTATCATGTTCGTATTTA 48113 | ||| | | ||| |||| | ||| | ||||| || ||||| || || Sbjct 2657 TACCATAGCTTTTGTGCC---ATAATGGTTCTGCGACCTTTACCTTCTTGTTCATACTTC 2601 Query 48114 GTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGA 48173 |||||| |||||||||||| ||||| |||| | |||| |||||||||||| || Sbjct 2600 TCATATAAAGCCTCAAATTCATCACCATAAACATCAGCTAAACCAGGACATTCACATGGG 2541 Query 48174 CACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAA 48233 ||||| | | ||| ||| ||| |||| ||||| ||||||| | ||| |||||||| Sbjct 2540 CACATAAGAGTCCATTCCCCATTTTTTTCAACTCTCTTCATAAAAAGATCAGGTATCCAT 2481 Query 48234 AGAGCTATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTC 48292 | || ||| |||| ||| | || | | |||||| || ||| |||| | || || Sbjct 2480 AAGGC-ATAGAATAGATCACGAGCGCGGACTTCTTCTTTACCATGATTCTTCCGGAGATC 2422 Query 48293 AAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCG 48352 |||||| || | ||| || ||||||||||| ||||| ||||| || | ||||||| || Sbjct 2421 AAGAAATTCAAATATGTCTGCATGCCATGGCTCTAAGTATATAGCGAAGGCACCTGGACG 2362 Query 48353 TTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGAC 48412 ||||| || ||||| || | ||||| || ||||||||| | |||| | |||||| || Sbjct 2361 CTTATTGCCACCTTGGTCAACGTATCTAGCGGTATTGTTAAAGACTCGAAGCATTGGCAC 2302 Query 48413 AATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACT 48472 ||| ||||| || | ||||| ||||| | ||||| || | || | ||| | Sbjct 2301 AATTCCATTGGAGTTTCCATTCGTTCCAGCGATATAGGCGCCTGTCGCACGGATACGATG 2242 Query 48473 AATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATC 48532 || | ||| |||||||| || |||| ||||| | || ||| ||| | ||||| Sbjct 2241 TATATTTAGACCAATACCACCGGCATTTTTGGATATCATTGCGCACGTTTTTAAAGTATC 2182 Query 48533 ATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGG 48592 || ||||| || |||||||| || |||| | | ||||||||| ||| | || | Sbjct 2181 GTAGATTCCATCAATACTATCCTCCTTCATGTCAATTAGAAAACATGAAGAAAGCTGTGA 2122 Query 48593 ATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAA 48652 || ||||| | | ||||||||| || |||||||| |||| |||| | || | Sbjct 2121 TTGTGGGGTTCCAGCAGCAAATAATGTAGGCGATGCATGCGTAAAATATTTATTGGACAT 2062 Query 48653 CAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACG 48712 ||| |||||||| || ||| |||| || || || ||| || || || | || ||||| Sbjct 2061 CAAGTTATATGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATCCCGACAGCAACACG 2002 Query 48713 CATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTT 48772 ||||| ||||| ||| || | || ||||| || | ||| | | |||||||||| | Sbjct 2001 CATTATCATATGTTGGGGCCGCTCCACAATCTTATCATTGAGCCGAAGAAGATATGATCT 1942 Query 48773 TTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAA 48822 ||||| || || || |||||||| | || ||| ||| ||||| || Sbjct 1941 TTCCAGCGTCTTGAAGCCAAAATACTGATAATTAAAATCGCGATCATAAA 1892 >seq32370 Length=2278 Score = 174 bits (192), Expect = 2e-38 Identities = 574/899 (64%), Gaps = 59/899 (7%) Strand=Plus/Plus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 |||||||| ||| |||| | ||||| |||||||| || || || | || || || | Sbjct 566 TTTTGATAATCGCCAACACGCTTTTCGAAGAAATTTGTCTTCCCAGCCAAGGAGATGTTT 625 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 ||||| || || || ||||| | | || || | ||| ||||||| || || Sbjct 626 TCCATGAAGTCGAACGGATTAGTAGCCTTGTAAACCTTTGGATTTCCTAATGATAGCAGC 685 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 | || ||| || ||||||| || || ||||| | ||||||| || | || | Sbjct 686 AATCGATCTGCAACAAATTCGATGTACTGCTTCATTAGGGTGGAATTCATACCAAGTAGT 745 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAA-- 18907 | ||||| |||||| || | || ||||||||||| | |||||| | | ||| | Sbjct 746 GCACAAGGTAATGCATCAGTTAAGAACTCTTGTTCTATTTCTACTGCTTGCGTTATCACG 805 Query 18908 --TAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGC 18965 | || || || | | || || || || | |||| || | | || || Sbjct 806 TCTTGA-ACGGCT-TGTTTTGAT--GGTCTGTGCTTCAAATGTGAGAAGAGAAGGCAAGC 861 Query 18966 AAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGG 19025 ||| || ||||| || || || | || |||||||| ||||| ||||| |||| Sbjct 862 AAAGTCCGTGTGTAGACCTTCATCACGTGAAATTAATTCATTTGAAAACGTTAACCCAGC 921 Query 19026 CATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACC 19085 ||| ||||||| ||| || | |||||| || ||||| ||||||||| || ||||| || Sbjct 922 CATAAGTCCTCGTTTCTTCAGCCAGAAAATTGAAGCGAATGATCCACTGAAAAATATCCC 981 Query 19086 TTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCA 19145 || || ||||||||||| || || | || |||| | | | || |||| | ||||| Sbjct 982 CTCGACAGCTGCAAAAGCCACAAGACGTTGTCCAAAGGTTGACTCTTTATCTTCGATCCA 1041 Query 19146 TTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCA---------------------- 19183 | || ||||| || || || ||||| | || || | Sbjct 1042 TCGCACAGCCCAGTCTGCTTTTTTTTTAATGCAGGGAACTGGGAACGGTTAGTTTAGGCC 1101 Query 19184 ------------------------TTGTCTCTATAGAATTAAATAGATACATACGCTCAT 19219 |||| || || | |||||| || || | || | Sbjct 1102 AGCTCATCGAAGGGGGAGAGTTACTTGTTTCAATGGCATTAAAGAGGTAGGTTTTCTGAG 1161 Query 19220 CTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTA 19279 | ||||| | ||| | ||| ||||| | ||| | || || ||||||||||| | Sbjct 1162 ATTGTTCTTTGATATAGGTATCGATCAACAGGGAGTAAGTCTCAGAGTGAATATTTTCCA 1221 Query 19280 TAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATC 19339 | ||||| ||||| ||||| ||| |||||| | ||||||||||| |||| || | Sbjct 1222 TCATTATCTGGAATCCATAAAAGAATCGTGCTTCAGGAATCTGTACTTCGCTACTGAAGC 1281 Query 19340 TTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATG-- 19397 |||||| | ||| || || || ||||| || ||||| |||||||| | ||| || Sbjct 1282 GTTCGACAAGATTCTCGTTGACAATTCCGTCTGATGCTGCGAAAAATGCAAGTACGTGAG 1341 Query 19398 -TTTAATAAAATGTTTTTCATC-TGAGGTTAATGTATTCCAATCATTAATATCTTTAGAT 19455 | ||| | || | | ||||| | || | ||||||| || | | |||||| || Sbjct 1342 ATATAAAATAACGCTCATCATCATTCAGTCTGT-TATTCCAGTCGTGTAGATCTTTGGAA 1400 Query 19456 AAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATAT 19514 | ||| | |||||| | |||||||| || ||||| || || || ||||| | |||||| Sbjct 1401 AGATCAATTTCTTCTGCAGTCCAAAAGGATGCCTCGGCCTTCTTGTACATTTGCCATAT 1459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561860769492000