Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000208805.1_202011-02-23] 35,300 sequences; 69,261,028 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq32863 154 3e-32 seq34573 114 3e-20 seq27687 107 4e-18 seq32370 84.2 4e-11 >seq32863 Length=2297 Score = 154 bits (170), Expect = 3e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| | ||||| || | ||||| ||||| ||| ||||| || Sbjct 866 ATACCACCACGGAGACGGAGAACTAAGTGCAGAGTAGATTCTTTTTGGATGTTATAGTCG 807 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| ||| |||| || | |||||||||||||||||| ||||| ||||| || ||| Sbjct 806 GAAAGTGTGCGTCCATCTTCAAGTTGTTTACCAGCAAAGATCAATCTTTGTTGGTCCGGT 747 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| |||||||| || || ||||||| || |||| || || || || Sbjct 746 GGGATGCCTTCCTTATCTTGGATCTTGCTTTTTACGTTGTCGATAGTGTCGGAAGACTCG 687 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTA 192514 || || || ||||||||||||||||||| Sbjct 686 ACCTCAAGGGTAATGGTTTTACCAGTTA 659 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 |||||||| ||||| | ||| ||||| | ||| | ||||| || || || ||| | Sbjct 1381 CCACCTCTGAGACGAAGTACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCATTT 1322 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | ||| || |||| || | || || || ||||| || ||||| |||||||| ||||| Sbjct 1321 AGTGTGCGCCCATCTTCAAGCTGCTTTCCCGCAAATATCAATCTTTGTTGATCCGGTGGG 1262 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || ||||||||||| || |||||| | ||||| || ||| | || || |||||||| Sbjct 1261 ATGCCTTCTTTATCCTGGATTTTACTCTTTACGTTGTCTATTGTGTCGGATGATTCTACC 1202 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| || || || || || ||||| ||||| | ||| || |||||| Sbjct 1201 TCTAGTGTTATTGTCTTGCCGGTTAAGGTTTTGACAAAAATTTGCATT 1154 Score = 113 bits (124), Expect = 9e-20 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||| ||||||||||| ||||| |||| || ||||| || || || || |||| || Sbjct 1108 ATATTGTAATCAGATAAGGTTCGGCCATCTTCTAATTGCTTTCCCGCGAAAATTAGTCGT 1049 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || || || ||||| ||||| ||||||||||| || || ||||||| || |||| | Sbjct 1048 TGCTGGTCCGGTGGAATTCCCTCTTTATCTTGAATCTTGCTTTTTACRTTGTCAATAGTA 989 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGT 192518 || || || || || || || ||||| || || ||||| | ||| Sbjct 988 TCAGATGACTCGACCTCAAGGGTAATTGTCTTCCCAGTGACTGT 945 >seq34573 Length=3214 Score = 114 bits (126), Expect = 3e-20 Identities = 163/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 || || | ||| || | ||| | ||| | || | ||||| ||| || ||||||||| Sbjct 1546 CCCCCACGAAGGCGAAGTACGAGATGAAGGGTTGATTCTTTTTGGATGTTGTAATCAGAT 1605 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || || || |||| || | |||||||| ||||| || || | ||||| ||||| || Sbjct 1606 AAGGTGCGGCCATCCTCAAGCTGTTTACCCGCAAAAATCAAACGTTGTTGGTCAGGGGGA 1665 Query 192430 ATTCCTTCTTTATCTTGTATTTTAT-TTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || || ||||||||||| ||||| | ||| |||||| |||| ||||| ||||| || Sbjct 1666 ATACCCTCTTTATCTTGGATTTTTTGATTTGACATTATCGATAGTGTCTGATGATTCCAC 1725 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| || ||||| || | || || | || || ||||| Sbjct 1726 CTCAAGTGTAATAGTCTTACCCGTGAGGGTCTTCACGAAAATTTGCAT 1773 >seq27687 Length=2946 Score = 107 bits (118), Expect = 4e-18 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 |||||||||||||| | || || |||| || | |||||| ||||| || || |||| | Sbjct 1965 ATATTATAATCAGAAAGCGTACGCCCATCTTCGAGTTGTTTGCCAGCGAAAATCAATCGC 2024 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 ||||| || || || |||||||| || ||||| || || ||| |||||| |||| | Sbjct 2025 TGTTGGTCCGGAGGAATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTATCGATAGTA 2084 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521 || || || || || || || || || ||||| || ||||| || || Sbjct 2085 TCGGAGGACTCGACCTCAAGTGTGATTGTTTTGCCCGTTAAGGTCTT 2131 >seq32370 Length=2278 Score = 84.2 bits (92), Expect = 4e-11 Identities = 173/257 (67%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 50124 TCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATAC 50183 ||||| || | | |||||| ||| || ||| |||||| || |||||| | | | Sbjct 1203 TCAGAGTGAATATTTTCCATCATTATCTGGAATCCATAAAAGAATCGTGCTTCAGGAATC 1262 Query 50184 TGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCG 50243 || |||||| | ||| ||||| || | |||||| ||||| || || ||||||||| Sbjct 1263 TGTACTTCGCTACTGAAGCGTTCGACAAGATTCTCGTTGACAATTCCGTCTGATGCTGCG 1322 Query 50244 AAGAATGCTAAAACGT---ATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTCCCAA 50300 || ||||| | |||| || ||| | || | | |||| || | || | ||| Sbjct 1323 AAAAATGCAAGTACGTGAGATATAAAATAACGCTCATCATCATTCAGTCTGTTATTCCAG 1382 Query 50301 GATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTT 50360 | ||||| || || | ||| | ||||||| |||||||| ||||| ||| || Sbjct 1383 TCGTGTAGATCTTTGGAAAGATCAATTTCTTCTGCAGTCCAAAAGGATGCCTCGGCCTTC 1442 Query 50361 TTATACATTTGATATAT 50377 || |||||||| |||| Sbjct 1443 TTGTACATTTGCCATAT 1459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984034738155000