Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000208805.1_202011-02-23] 35,300 sequences; 69,261,028 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq32863 136 7e-27 seq34573 114 2e-20 seq27687 111 3e-19 >seq32863 Length=2297 Score = 136 bits (150), Expect = 7e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || | ||||| || | ||||| ||||| || ||||| || Sbjct 866 ATACCACCACGGAGACGGAGAACTAAGTGCAGAGTAGATTCTTTTTGGATGTTATAGTCG 807 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | ||| | || || | ||||||||||||||| || ||||| |||||||| ||| Sbjct 806 GAAAGTGTGCGTCCATCTTCAAGTTGTTTACCAGCAAAGATCAATCTTTGTTGGTCCGGT 747 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || || ||||||| || ||||| || || || || Sbjct 746 GGGATGCCTTCCTTATCTTGGATCTTGCTTTTTACGTTGTCGATAGTGTCGGAAGACTCG 687 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTA 172047 || || || ||||||||||||||||||| Sbjct 686 ACCTCAAGGGTAATGGTTTTACCAGTTA 659 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 |||||||| || || | ||| ||||| | ||| | ||||| ||| || || || | Sbjct 1381 CCACCTCTGAGACGAAGTACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCATTT 1322 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | || || | || || || ||||| || ||||| ||||| || ||||| Sbjct 1321 AGTGTGCGCCCATCTTCAAGCTGCTTTCCCGCAAATATCAATCTTTGTTGATCCGGTGGG 1262 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || ||||||||||| || |||||| | ||||| || ||| || || || |||||||| Sbjct 1261 ATGCCTTCTTTATCCTGGATTTTACTCTTTACGTTGTCTATTGTGTCGGATGATTCTACC 1202 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| || || || || || ||||| ||||| | || || |||||| Sbjct 1201 TCTAGTGTTATTGTCTTGCCGGTTAAGGTTTTGACAAAAATTTGCATT 1154 Score = 116 bits (128), Expect = 7e-21 Identities = 129/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 171879 TCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAA 171938 ||||| |||||| ||||| ||||| | ||| | || || ||||| || || || ||| Sbjct 1117 TCTTTTTGAATATTGTAATCAGATAAGGTTCGGCCATCTTCTAATTGCTTTCCCGCGAAA 1058 Query 171939 ATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 171998 |||| || || ||||| ||||| ||||| ||||||||||| || || ||||||| || Sbjct 1057 ATTAGTCGTTGCTGGTCCGGTGGAATTCCCTCTTTATCTTGAATCTTGCTTTTTACRTTG 998 Query 171999 GTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGT 172051 |||||||| || || || || || || ||||| || || ||||| | ||| Sbjct 997 TCAATAGTATCAGATGACTCGACCTCAAGGGTAATTGTCTTCCCAGTGACTGT 945 >seq34573 Length=3214 Score = 114 bits (126), Expect = 2e-20 Identities = 136/183 (74%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| ||||| | || | || || | |||||||| |||||||| || | Sbjct 1591 ATGTTGTAATCAGATAAGGTGCGGCCATCCTCAAGCTGTTTACCCGCAAAAATCAAACGT 1650 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT-TTTTTACATTAGTTATAGT 172006 ||||||||||| || || || ||||||||||| ||||| | ||| |||||| ||||| Sbjct 1651 TGTTGGTCAGGGGGAATACCCTCTTTATCTTGGATTTTTTGATTTGACATTATCGATAGT 1710 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||||| ||||| || || || ||||| || ||||| || | || || | ||| || || Sbjct 1711 GTCTGATGATTCCACCTCAAGTGTAATAGTCTTACCCGTGAGGGTCTTCACGAAAATTTG 1770 Query 172067 CAT 172069 ||| Sbjct 1771 CAT 1773 >seq27687 Length=2946 Score = 111 bits (122), Expect = 3e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||||||||| || | | || | || || | |||||| ||||| ||||| |||| Sbjct 1964 AATATTATAATCAGAAAGCGTACGCCCATCTTCGAGTTGTTTGCCAGCGAAAATCAATCG 2023 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||||||||| || || |||||||| || ||||| || || ||| |||||| ||||| Sbjct 2024 CTGTTGGTCCGGAGGAATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTATCGATAGT 2083 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060 ||| || || || || || || || || ||||| || ||||| || || | ||| Sbjct 2084 ATCGGAGGACTCGACCTCAAGTGTGATTGTTTTGCCCGTTAAGGTCTTGACGAA 2137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904736608740000