Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000208805.1_202011-02-23] 35,300 sequences; 69,261,028 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq27947 210 5e-49 seq22916 96.9 8e-15 seq29661 93.3 1e-13 seq27868 86.0 1e-11 >seq27947 Length=2872 Score = 210 bits (232), Expect = 5e-49 Identities = 546/828 (66%), Gaps = 7/828 (1%) Strand=Plus/Plus Query 110273 TATCGATTATACTCGTGACTATGATATTGACTATTTTGGTTTCAAAACTCTTGAACGTGC 110332 ||| | |||| ||| || | | || | | |||||||| ||||| || || ||| | | Sbjct 1887 TATAGTTTATGATCGCGATTTTAATTATCAGTATTTTGGCTTCAAGACGCTGGAAAGATC 1946 Query 110333 TTATTTACTTCGTGTCAATGGCGAGATCATTGAACGTCCTCAACACATGTTTCTTCGTGT 110392 ||| | ||||| |||||| |||| | || || || ||||| ||| | | ||||| Sbjct 1947 ATATCTTCTTCGGCTCAATGATAAGATTGTGGAGCGGCCCCAACATATGATAATGCGTGT 2006 Query 110393 TGCGATTGGTATTCATGGACATGATATTAAAGCTGTTATTGAATGTTATGATGTATTAAG 110452 ||| | || ||||| | |||| ||| || ||| ||| || ||| | | | Sbjct 2007 TGCTGTCGGGATTCACCAAGATGACATTGAATCTGCTATAGAGACATATAACTTGATGTC 2066 Query 110453 TAAAAAGAAAGCTATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACA 110512 || || | || ||||| | ||||| ||||| || ||||| | ||| Sbjct 2067 CAATAAATATTTTACGCATGCATCGCCTACATTATTTGCTGCTGGAACCCCACAATCACA 2126 Query 110513 ATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGC 110572 | |||| || ||||| | | || || || ||| |||||| || || || ||| | Sbjct 2127 GCTTTCTTCATGTTTTCTAATTGACATGAAGGAGGATAGTATTGATGGAATCTACGATAC 2186 Query 110573 TCTTAAAGAAACTGCTC--TTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630 | ||||| || ||| | | || || ||||| | || || |||||| | | | ||| Sbjct 2187 T-TTAAA-AACGTGCGCAATGATATCCAAAAATGCCGGTGGTATTGGTCTAAATATACAT 2244 Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690 ||| || | | ||| || ||||||| | |||| || || | |||| |||| Sbjct 2245 CGTATCCGTGCGACAGGCGCCTATATCGCTGGAACGAATGGAAACTCCAATGGAATTGTG 2304 Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGA 110747 |||||| | ||||||| ||| | || || | ||| || | |||||||| |||| | Sbjct 2305 CCAATGCTTCGAGTCTTTAACAATACCGCTAGATACGTTGACCAAGGTGGCAATAAGCGT 2364 Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807 || | || ||||| || | || || |||||| |||| ||||||||||| | || Sbjct 2365 CCAGGTGCCTTCGCTATATACTTAGAGCCATGGCATGCAGACATATTTGAATTTCTTGAT 2424 Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867 || || || ||||| || |||||| | || |||||| |||| ||||| | ||| Sbjct 2425 CTCCGGAAGAATCATGGTAAAGAAGAAGTCCGCGCTCGTGATCTATTCTATGCCTTATGG 2484 Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCT 110927 || | ||| | || ||||| | ||| || ||||||| ||| |||||||||| || Sbjct 2485 ATACCTGATCTTTTTATGAAGAGAGTTGAAAAAAATGGGGAATGGACTCTTATGTGCCCA 2544 Query 110928 CATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAA 110987 | | ||||||| || ||||||| ||||| | || ||||| | | || || || Sbjct 2545 TGTGAATGTCCTGGTTTAGCTGATGTTTATGGTGATGAATTTGAGGCTTTATATGAGAAG 2604 Query 110988 TATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATC 111047 |||||| ||||||| || ||||| | ||| || ||| | || |||| | || Sbjct 2605 TATGAACAAGAAGGTAAAGGTCGCAGAACCATTATGGCACAAAAGCTATGGTACTCGATA 2664 Query 111048 CTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGAT 111095 ||||| ||||| |||||| || ||||| | ||| | || |||||| Sbjct 2665 GTTGAAGCACAAACTGAAACCGGTACTCCGTTTATGCTTTACAAAGAT 2712 >seq22916 Length=2120 Score = 96.9 bits (106), Expect = 8e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 ||| | || |||||||| ||||| ||||||| | ||| ||| |||| | || || Sbjct 1929 GTTTTATTTAATAGGCAGCCATCTTTGCATAAGCTTAGTATCATGAGTCATTATGTAAAG 1988 Query 305390 GTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGAT 305449 || | | | || ||| | ||||||| ||| |||||| ||||| ||||| ||| Sbjct 1989 GTTAGACCATGGCGAACTTTTAGGTTAAATGAGTGTGTTTGTACACCTTACAATGCAGAT 2048 Query 305450 TTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 ||||||||||||||||||||| | || ||||||||| Sbjct 2049 TTTGATGGAGATGAAATGAATCTACACGTACCTCAA 2084 >seq29661 Length=4534 Score = 93.3 bits (102), Expect = 1e-13 Identities = 178/257 (69%), Gaps = 8/257 (3%) Strand=Plus/Plus Query 304889 CAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCTCAA 304948 ||||| ||| | || |||| ||||||||||| || ||||| |||||| ||| Sbjct 298 CAATACCATGTAGCTACATATATGGATAATGATATCGCTGGTCAGCCTCAGGCACTCCAA 357 Query 304949 AGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTATT 305008 | ||||| |||||| | ||| |||||| || |||| ||||| || |||||| || Sbjct 358 AAGTCTGGTAGACCTGTTAAGTCTATTAGAGCCCGTCTTAAGGGTAAGGAAGGTCGTCTT 417 Query 305009 CGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCTGAT 305068 |||||||| | ||||| || || ||||||||| ||| | | ||| || || |||| Sbjct 418 CGAGGTAACTTGATGGGTAAGCGGGTTGATTTTTCGGCACGGACTGTCATAACGGGTGAT 477 Query 305069 TCTCAAAT-TA-GTCTTCATGAATTAGGAGTTCCAATTGAA--ATTGCTTTAAAACTAAC 305124 ||||| || || | ||| | ||||| || | ||| |||||| | |||||| Sbjct 478 --CCAAATCTATCACTCGACGAAGTTGGAGTACC--TAGAAGTATTGCTCGGACACTAAC 533 Query 305125 ATTTCCAGAGAAAGTTA 305141 | ||| |||| |||| Sbjct 534 TTATCCTGAGACTGTTA 550 >seq27868 Length=3492 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/121 (76%), Gaps = 3/121 (2%) Strand=Plus/Plus Query 113783 TTTTTT---CGTAAAAATATCTGTCGCAACAAAATGACACTTTGCATGACCATGTTTTCC 113839 |||||| ||| || ||||| | |||||| |||| |||||||||||||| || || Sbjct 980 TTTTTTGCCCGTGAATATATCAATTCCAACAAGATGAACTTTTGCATGACCATGCTTGCC 1039 Query 113840 AGTTTTTGATGTTGATATGGAATTTACTTTACACGGACGATTCTTAATTACAATATAACC 113899 |||||||||||| || || | ||| ||| || ||||||||||| || |||| | | || Sbjct 1040 AGTTTTTGATGTAGACATCTCAGTTATTTTGCATGGACGATTCTTGATCACAACAAACCC 1099 Query 113900 A 113900 | Sbjct 1100 A 1100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186276026823300