Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000208805.1_202011-02-23] 35,300 sequences; 69,261,028 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq27947 104 3e-17 seq29933 102 1e-16 seq18467 86.0 8e-12 >seq27947 Length=2872 Score = 104 bits (114), Expect = 3e-17 Identities = 603/949 (64%), Gaps = 31/949 (3%) Strand=Plus/Minus Query 111218 TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCT 111277 || ||||| | || || || | |||||||||||||| ||||| ||||| | | Sbjct 2852 TTTACATATGTGGGCAGTGCTAGAGATGCCAAATTGCACACAGCTACTTCATCTGGAGAT 2793 Query 111278 GTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 111337 | ||| || | ||||| || || | ||| || || || ||||| | || || || Sbjct 2792 GAGTATTCAACTATTTCGGTGCAAAGGTTAGAGCTGCGGATAGTCCCGAGGTTTTTCTGA 2733 Query 111338 TTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 111397 ||||| ||||||||||| ||||| ||||| ||||| | || || || || || || ||| Sbjct 2732 TTACTTTTCTTGTTGCAAGCATCTTTGTAAAGCATAAACGGAGTACCGGTTTCAGTTTGT 2673 Query 111398 GATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTG-GCCCGT--CC 111453 | || | || | | ||| | | | | || | ||||| || | || | || Sbjct 2672 GCTTCAACTATCGAGTACCATAGCTTTTG----TGCCATAATGGTTCTGCGACCTTTACC 2617 Query 111454 CTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACC 111513 || || ||||| || | || ||||| || ||||| | || | | ||| Sbjct 2616 TTCTTGTTCATACTTCTCATATAAAGCCTCAAATTCATCACCATAAACATCAGCTAAACC 2557 Query 111514 TGGTGCCTTGTC-TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGA 111572 || | || | ||| || | ||||| ||||| ||| || ||||| | |||||| | Sbjct 2556 AGG-ACATTCACATGGGCACATAAGAGTCCATTCCCCATTTTTTTCAACTCTCTTCATAA 2498 Query 111573 AAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTT 111632 |||| || || ||||| | || | || ||||| | | || | ||||| | ||| | Sbjct 2497 AAAGATCAGGTATCCATAAGGCATAGAATAGATCACGAGCGCGGACTTCTTCTTTACCAT 2438 Query 111633 GGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTG 111692 | || || | ||||| || || | || || || ||||||||||| | || | | Sbjct 2437 GATTCTTCCGGAGATCAAGAAATTCAAATATGTCTGCATGCCATGGCTCTAAGTATATAG 2378 Query 111693 CGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAA 111746 ||| | || | ||||| ||| |||| | || || | || || ||||| Sbjct 2377 CGAAGGCACC---TGGACGCTTATTGCCACCTTGGTCAACGTATCTAGCGGTATTGTTAA 2321 Query 111747 ATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG-TCCCCCGA-ATACGAGA 111804 | || ||||||||||| | ||| |||| || | ||||| | ||| ||| ||| | | Sbjct 2320 AGACTCGAAGCATTGGCACAATTCCATTGGAGTTTCCATTCGTTCCAGCGATATAGGCGC 2261 Query 111805 TTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--T 111862 | | || | | | ||| || | | |||||||| || || || || || | Sbjct 2260 CT--GTCGCACGGATACGATGTATATTTAGACCAATACCACCGGCATTTTTGGATATCAT 2203 Query 111863 TGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATA 111922 ||||||| | | | ||| | ||||| || | || |||||||| || | || Sbjct 2202 TGCGCACGTT--TTTAAAGTATCGTAGATTCCATCAATACTATCCTCCTTCATGTCAATT 2145 Query 111923 AGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCG 111982 || || || || | ||| | | ||| || |||||| || | || || | ||| Sbjct 2144 AGAAAACATGAAGAAAGCTGTGATTGTGGGGTTCCAGCAGCAAATAATGTAGGCGATGCA 2085 Query 111983 TGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTC 112041 || | || ||| | | ||||||| || |||||||| | |||| |||||||| || Sbjct 2084 TGCGT-AAAATATTTATTGGACATCAAGTTATATGTCTCTATAGCAGATTCAATGTCATC 2026 Query 112042 CCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCC 112101 ||| || |||| || || ||||| | ||| | || || |||| | | | Sbjct 2025 TTGGTGAATCCCGACAGCAACACGCATTATCATATGTTGGGGCCGCTCCACAATCTTATC 1966 Query 112102 ATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 || |||||| ||||||| | |||| || || || |||| ||||| || Sbjct 1965 ATTGAGCCGAAGAAGATATGATCTT-TCCAGCGTCTTGAAGCCAAAATA 1918 >seq29933 Length=4207 Score = 102 bits (112), Expect = 1e-16 Identities = 258/386 (67%), Gaps = 20/386 (5%) Strand=Plus/Minus Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAA--TGCCAGTCTCAT-TGTC 11538 |||||| | ||| | ||||||| | || | ||| |||| ||| ||| | ||| Sbjct 4197 ATCAAGCACATCTGGTCTATTAGTGCCAGCGAGAACGACAACTTGC---TCTGAAGTGTT 4141 Query 11539 AAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGG 11598 || ||||||||||| || | || ||||| | ||| |||||| |||||||| | Sbjct 4140 GAAACCATCCATCTCAGTTAATATCTGATTTAATGTAGCTTCTCTTTCATCATTACC--- 4084 Query 11599 CATACCA------CCAGC---ACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAA 11649 | |||| ||| | || || || || | |||||||||||||| || || Sbjct 4083 CCCACCAAATGAGCCAACCTTACCACGAGATTTACCAATAGCATCAATCTCATCTATAAA 4024 Query 11650 GACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACC 11709 | |||||||||| ||| | ||| || | || |||||||| || | | |||||| Sbjct 4023 AATAATACATGGTGTATTCTTGCGAGCTTCGGCGAAAAGATCGCGCACTCGTGAGGCACC 3964 Query 11710 CACACCAACAAACATCTCCACAAAGTTTGCGGCA-GAGCACTGGATGAATGGGACATTTG 11768 |||||||||||||| || ||||| | || || |||| || ||||||||| | || Sbjct 3963 TACACCAACAAACATTTCTACAAACTCTGATCCACTTACACT-GAAGAATGGGACCTGTG 3905 Query 11769 ATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAA 11828 ||||||| || | ||| || | || || || || || ||||| || | || | Sbjct 3904 ATTCACCTGCCGTTGCTTTTGCCAAAAGTGTTTTCCCAGTTCCTGGTGGTCCAGAAAGGA 3845 Query 11829 GGGCGCCTCGGGGGATCTTGGCACCA 11854 || ||||| || ||||| || ||| Sbjct 3844 TTGCTCCTCGTGGTATCTTAGCGCCA 3819 >seq18467 Length=1410 Score = 86.0 bits (94), Expect = 8e-12 Identities = 272/410 (66%), Gaps = 10/410 (2%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGG 110765 ||| ||||| | || ||||||||||| || |||||| | |||||| |||| ||| Sbjct 476 GTATATGTTGGAGGTATATGGTTCAAAACACTCATTAA-ATCCAAGAATTTGACTAGTGC 418 Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825 || || ||||| || || | | | ||| |||||||| || | | ||||| Sbjct 417 TTGCAGTCGGCATAGGAGCTACAAGCAAACTATTACGAAGCCCGTACATTTTGATCTCAG 358 Query 110826 CCTTGAGAACATCCCAGTCGTAGTTGAG-CT-TGGTTTCACCTTCCCACATGTCAAACTG 110883 | || | | ||||||||| | | || || ||| | | | ||||||| ||| | || Sbjct 357 CTTTTAAAGAATCCCAGTCCCA--TAAGTCTGTGGGTGTAACACCCCACATATCATATTG 300 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 |||| | |||| || |||||||| ||||| | || ||||| | || | || ||| Sbjct 299 AAGCTCGCCTTTCGAGGCGGGAGAGCCCTCGTAAGTCTCATAAGTGCCCAGTTTTTTAGC 240 Query 110944 CAATTCA-CAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002 ||| ||| | | | | ||| | || ||||| || ||||||||||| | ||| | Sbjct 239 CAAGTCAACTGATGAGGTTAAGGCA-GCATGATATATAGTTTCAAAGATCTGCTTATTGA 181 Query 111003 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGA 111061 | || || || | || || |||| | || || | | |||||||||||| ||| Sbjct 180 GATGTTTTGCCTCTTGGGAGTCGAATGGCAAACG-CAGAGCCAAAAATACATCCGCTAGA 122 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC 111111 ||||| || || | ||||||||| || || | |||| ||| || || Sbjct 121 CCTTGGACTCCTACCGCAATAGGTCGATGGCGAAAATTACTCTTACGAGC 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627754880880000