Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000208805.1_202011-02-23] 35,300 sequences; 69,261,028 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq34573 140 4e-28 seq32863 132 5e-26 seq27687 131 2e-25 seq32370 111 2e-19 >seq34573 Length=3214 Score = 140 bits (154), Expect = 4e-28 Identities = 169/229 (74%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| || || || ||||||||||| |||||||| || ||| Sbjct 1773 ATGCAAATTTTCGTGAAGACCCTCACGGGTAAGACTATTACACTTGAGGTGGAATCATCA 1714 Query 27466 GATAGCATTGCAAATTTGAAGGC-TAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | || | ||| | || | ||||| || || || ||||| ||||| || ||||| Sbjct 1713 GACACTATCGATAATGTCAAATCAAAAAATCCAAGATAAAGAGGGTATTCCCCCTGACCA 1654 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||| | |||||||| ||||| || || ||||||| || ||| || | || || || Sbjct 1653 ACAACGTTTGATTTTTGCGGGTAAACAGCTTGAGGATGGCCGCACCTTATCTGATTACAA 1594 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 ||||||| ||||| || |||||||| || | || ||||| || ||| Sbjct 1593 CATCCAAAAAGAATCAACCCTTCATCTCGTACTTCGCCTTCGTGGGGGA 1545 >seq32863 Length=2297 Score = 132 bits (146), Expect = 5e-26 Identities = 154/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTG-CAAATTTGAAGGC 27488 || || ||||| ||||| |||||||| |||||| ||||| |||| ||| | || || Sbjct 951 ACTGGGAAGACAATTACCCTTGAGGTCGAGTCATCTGATACTATTGACAAYGTAAAAAGC 1010 Query 27489 TAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAA 27548 || ||||| || || ||||||||||| || |||||||| || |||||||| || || || Sbjct 1011 -AAGATTCAAGATAAAGAGGGAATTCCACCGGACCAGCAACGACTAATTTTCGCGGGAAA 1069 Query 27549 GCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 |||| | || |||| || ||| || | || || ||| | ||||| ||||| || ||||| Sbjct 1070 GCAATTAGAAGATGGCCGAACCTTATCTGATTACAATATTCAAAAAGAATCAACCCTTCA 1129 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGGA 27633 || || | ||||| || || ||| Sbjct 1130 CCTGGTTCTTCGTCTACGGGGAGGA 1154 Score = 113 bits (124), Expect = 5e-20 Identities = 166/234 (71%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| |||||||| || | ||||||||||| || || || ||||| || ||| Sbjct 1154 AATGCAAATTTTTGTCAAAACCTTAACCGGCAAGACAATAACACTAGAGGTAGAATCATC 1213 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | || | || | ||| |||||| ||||| || || || || || || || || Sbjct 1214 CGACACAATAGACAACGTAAAGAGTAAAATCCAGGATAAAGAAGGCATCCCACCGGATCA 1273 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | || ||||| || ||||| || || |||| || || ||| ||||| || Sbjct 1274 ACAAAGATTGATATTTGCGGGAAAGCAGCTTGAAGATGGGCGCACACTAAATGACTACAA 1333 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGT 27638 | ||||| ||||| ||||||||| | || | ||||| | ||||| ||||| Sbjct 1334 CATTCAAAAAGAATCAACTCTTCATTTGGTACTTCGTCTCAGAGGTGG-CAAGT 1386 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTG-CAAATTTGAAGGC 27488 || || || || ||||| |||||||| ||||| || | || | ||| | || || Sbjct 661 ACTGGTAAAACCATTACCCTTGAGGTCGAGTCTTCCGACACTATCGACAACGTAAAAAGC 720 Query 27489 TAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAA 27548 || || || || ||||| || || || || ||||| || | | || ||||||||||| Sbjct 721 -AAGATCCAAGATAAGGAAGGCATCCCACCGGACCAACAAAGATTGATCTTTGCTGGTAA 779 Query 27549 GCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 ||||| || |||| || || || | |||||||| ||||||| ||||| ||||| || Sbjct 780 ACAACTTGAAGATGGACGCACACTTTCCGACTATAACATCCAAAAAGAATCTACTCTGCA 839 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| | ||||| || ||||| Sbjct 840 CTTAGTTCTCCGTCTCCGTGGTGG 863 >seq27687 Length=2946 Score = 131 bits (144), Expect = 2e-25 Identities = 137/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| | || ||||| || || || |||||||| ||||| |||| || Sbjct 2138 CTTCGTCAAGACCTTAACGGGCAAAACAATCACACTTGAGGTCGAGTCCTCCGATACTAT 2079 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| |||| || || ||||| |||||||| ||||||||||| ||||| ||||| | Sbjct 2078 CGATAATGTGAAAGCCAAGATTCAAGACAAGGAAGGAATTCCTCCGGACCAACAGCGATT 2019 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 ||||| ||||| || |||||||| |||| ||||| || | || |||||| | ||||| Sbjct 2018 GATTTTCGCTGGCAAACAACTCGAAGATGGGCGTACGCTTTCTGATTATAATATTCAAAA 1959 >seq32370 Length=2278 Score = 111 bits (122), Expect = 2e-19 Identities = 339/512 (66%), Gaps = 28/512 (5%) Strand=Plus/Minus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT-GAA--TCGTGGGTCGTCGTTTGGTCAGCGT 64719 ||||| || || ||||| | || ||||| ||| | | ||| | ||||| || ||| Sbjct 1065 AAAAAAGCAGACTGGGCTGTGCGATGGATCGAAGATAAAGAGTCAACCTTTGGACAACGT 1006 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 || | |||||||| ||| || || || || || ||| |||||| ||| |||||| Sbjct 1005 CTTGTGGCTTTTGCAGCTGTCGAGGGGATATTTTTCAGTGGATCATTCGCTTCAATTTTC 946 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || || || || || ||| | || | ||||||| || || | || || || Sbjct 945 TGGCTGAAGAAACGAGGACTTATGGCTGGGTTAACGTTTTCAAATGAATTAATTTCACGT 886 Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCTCAAGGACAAAC 64897 || || || || ||| || ||||| || || || ||| || | ||| ||| || Sbjct 885 GATGAAGGTCTACACACGGACTTTGC--TTGCCTTCTCTTCTCACATTTGAAGCACAGAC 828 Query 64898 CATCA---CATG--GGACTATAATTGATATAGTAAAATCGGCTGTAGAAATTGAAAAGGA 64952 ||||| || | | | | | ||||| | || || |||||||| ||| | || Sbjct 827 CATCAAAACAAGCCGTTCAAGACGTGATAACGCAA-----GCAGTAGAAATAGAACAAGA 773 Query 64953 ATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACA 65012 ||| | |||| || | || ||| || | || ||| || || ||||| || Sbjct 772 GTTCTTAACTGATGCATTACCTTGTGCACTACTTGGTATGAATTCCACCCTAATGAAGCA 713 Query 65013 GTATATCGAATTTGTAGCAGATCGCCTGCT--TACTCAGTTTGGTATT---AAGCCCTAC 65067 ||| ||||||||||| |||||||| |||| || ||| || || | | ||| ||| Sbjct 712 GTACATCGAATTTGTTGCAGATCGATTGCTGCTA-TCA-TTAGGAAATCCAAAGGTTTAC 655 Query 65068 TGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAAC 65127 || || | ||||| || |||| ||||| | ||| | ||| |||||||| || Sbjct 654 ---AAGGCTACTAATCCGTTCGACTTCATGGAAAACATCTCCTTGGCTGGGAAGACAAAT 598 Query 65128 TTTTTTGAAAAGAGGGTAGGTGATTACTCAAA 65159 || || |||||| | || || ||||| ||||| Sbjct 597 TTCTTCGAAAAGCGTGTTGGCGATTA-TCAAA 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570058750536000