Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000208805.1_202011-02-23] 35,300 sequences; 69,261,028 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq34573 138 3e-27 seq16137 129 1e-24 seq27687 120 7e-22 seq32863 109 1e-18 seq13632 105 2e-17 >seq34573 Length=3214 Score = 138 bits (152), Expect = 3e-27 Identities = 165/223 (74%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || || || || || ||||||||||||| |||||||| | || || Sbjct 1551 ACGAAGGCGAAGTACGAGATGAAGGGTTGATTCTTTTTGGATGTTGTAATCAGATAAGGT 1610 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || ||||| || || || || || | ||||||||||| || |||||||| Sbjct 1611 GCGGCCATCCTCAAGCTGTTTACCCGCAAAAATCAAACGTTGTTGGTCAGGGGGAATACC 1670 Query 225612 TTCCTTGTCTTGGATCTTTTG-CTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 || || |||||||| ||||| || ||| ||||| |||||||| | |||||| || | Sbjct 1671 CTCTTTATCTTGGATTTTTTGATTTGACATTATCGATAGTGTCTGATGATTCCACCTCAA 1730 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| ||||| | || || | ||| | |||||| Sbjct 1731 GTGTAATAGTCTTACCCGTGAGGGTCTTCACGAAAATTTGCAT 1773 >seq16137 Length=2014 Score = 129 bits (142), Expect = 1e-24 Identities = 205/292 (70%), Gaps = 5/292 (2%) Strand=Plus/Minus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||||||||| |||| | ||||||||| | || ||||| |||||| | | Sbjct 1829 ACATTATATTTAATGTTTGCTTTATTTTCTGGTTTAATCGGTACAGCWTTTTCTGTTTTA 1770 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAG-TGGTAATAGCCAACTTTA 7559 || || ||||| ||||| || || ||| |||| ||| | || |||| ||| | || Sbjct 1769 ATTAGATTAGARTTAGCAGCACCTGGTGTTCAA-TATATATCTGATAAT---CAAGTATA 1714 Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619 || ||| || || || || || || | |||||||||||| | |||||||| | | Sbjct 1713 TAATAGTATAATAACAGCTCACGCTATTTTAATGATTTTCTTTATGGTTATGCCTGCATT 1654 Query 7620 GATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTT 7679 || || || || || |||| || | || ||| | | |||| |||||||||||| || Sbjct 1653 AATTGGAGGATTTGGTAATTTCTTATTACCATTATTAGTGGGTGGTCCTGATATGGCATT 1594 Query 7680 TCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 ||| || | || ||||| |||||||||||| || ||| |||||| || Sbjct 1593 TCCTAGATTAAATAATATTAGTTTTTGATTATTAGTACCTAGTTTATTTTTA 1542 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/101 (81%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCT 370729 ||||||||| ||||||||||||||||||||||| ||||| |||||||| || || || Sbjct 1149 TTCAGGATGTCCAAAAAATCAGAATAAATGTTGGAATAAA--ATAGGATCTCCACCACCA 1206 Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 | | ||||| || ||| ||||| |||||||||||||| Sbjct 1207 GCTACTTCAAAGAATGAAGTGTTAAAGTTTCTATCAGTTAA 1247 >seq27687 Length=2946 Score = 120 bits (132), Expect = 7e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 ||||||| | ||| ||||| | | || | ||||||||| || || || |||||||| | Sbjct 1957 CTTTTTGAATATTATAATCAGAAAGCGTACGCCCATCTTCGAGTTGTTTGCCAGCGAAAA 2016 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 | | ||| |||||||| || ||||| |||||||||||||| ||||| |||||| | Sbjct 2017 TCAATCGCTGTTGGTCCGGAGGAATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTAT 2076 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703 |||| || || |||| || || || | ||||| || |||||||| || || || | || Sbjct 2077 CGATAGTATCGGAGGACTCGACCTCAAGTGTGATTGTTTTGCCCGTTAAGGTCTTGACGA 2136 Query 225704 A 225704 | Sbjct 2137 A 2137 >seq32863 Length=2297 Score = 109 bits (120), Expect = 1e-18 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || ||||||||||| | ||||||||| | || |||| |||||| Sbjct 1138 AGAACCAGGTGAAGGGTTGATTCTTTTTGAATATTGTAATCAGATAAGGTTCGGCCATCT 1079 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 |||| ||||| || ||||| || |||||||| ||||| || ||||| || || || ||| Sbjct 1078 TCTAATTGCTTTCCCGCGAAAATTAGTCGTTGCTGGTCCGGTGGAATTCCCTCTTTATCT 1019 Query 225622 TGGATCTT 225629 || ||||| Sbjct 1018 TGAATCTT 1011 Score = 107 bits (118), Expect = 5e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || ||||| ||||||||||| | ||||| || | || | ||||||||| |||||| Sbjct 1357 TGAAGAGTTGATTCTTTTTGAATGTTGTAGTCATTTAGTGTGCGCCCATCTTCAAGCTGC 1298 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || || || || | || |||||| || || || || ||||| || || ||||| || Sbjct 1297 TTTCCCGCAAATATCAATCTTTGTTGATCCGGTGGGATGCCTTCTTTATCCTGGATTTTA 1238 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| || || || ||||| || | ||| || |||| || || |||||||| || Sbjct 1237 CTCTTTACGTTGTCTATTGTGTCGGATGATTCTACCTCTAGTGTTATTGTCTTGCCGGTT 1178 Query 225691 AAAGTTTTTATGAACACTTGCATT 225714 || ||||| | || | ||||||| Sbjct 1177 AAGGTTTTGACAAAAATTTGCATT 1154 Score = 100 bits (110), Expect = 7e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| ||||| ||||||||||||| || || |||| | || | |||||| Sbjct 848 AGAACTAAGTGCAGAGTAGATTCTTTTTGGATGTTATAGTCGGAAAGTGTGCGTCCATCT 789 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || ||||| ||||| | || ||||||||| || || || |||||||| ||| Sbjct 788 TCAAGTTGTTTACCAGCAAAGATCAATCTTTGTTGGTCCGGTGGGATGCCTTCCTTATCT 729 Query 225622 TGGATCTT 225629 |||||||| Sbjct 728 TGGATCTT 721 >seq13632 Length=1087 Score = 105 bits (116), Expect = 2e-17 Identities = 191/275 (69%), Gaps = 6/275 (2%) Strand=Plus/Plus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||| ||||| |||| || || ||| | ||||||| ||| ||| | || Sbjct 703 ACTTTATACTTAATGTTTGCATTATTCTCAGGTTTATTAGGTACAGCATTCTCTGTACTT 762 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATATTGAGTGGTAATAGCCAACTTTA 7559 ||||| ||||| ||| ||| || ||| |||| |||||| || |||| ||| | || Sbjct 763 ATAAGATTAGAGTTATCTGGACCTGGTGTTCAATATATTGC-TGATAAT---CAATTATA 818 Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTA-TGCCGGTTA 7618 || ||| ||||| || || ||| | | ||||||||||| | |||| |||| | | Sbjct 819 TAATAGTATAATTACAGCTCACGCCATAATGATGATTTTCTTCATGGTTACTGCCTGGTT 878 Query 7619 TGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTT 7678 | || | |||||||| |||| || | || ||| | | || | ||| |||||||| | Sbjct 879 TACTAAGTGGTTTCGGTAATTTCTTATTACCATTATTAGTAGGGGGTCCAGATATGGCAT 938 Query 7679 TTCCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 | || || || || || || ||||| |||||| || Sbjct 939 TCCCTAGACTAAATAACATTAGTTTCTGATTATTA 973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191991840498200