Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000214055.1_202011-02-23] 26,142 sequences; 41,448,213 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq6804 419 3e-112 seq7170 136 5e-27 >seq6804 Length=2818 Score = 419 bits (464), Expect = 3e-112 Identities = 1204/1838 (66%), Gaps = 39/1838 (2%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||| ||||| ||||| ||||| | | || |||| ||| ||||| || || |||| Sbjct 984 GTGAACTGAATAGGAGCAGATGCAGCCATAGTCCGTAAATAATACATGCCGGTCTTTAAG 1043 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || || |||| ||| ||| ||||||||||| | |||| | ||||| | Sbjct 1044 CCCAGTTTCCAGCCGGCAAAGTGCATACTTGTAATTTTGCCCATGGTTGGATCCTTCAAG 1103 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 ||||||||||| || || ||||| || || || || | || |||||||| | || Sbjct 1104 TGGATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 1163 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047 || || |||| |||||||| | ||||||||| | || | || | || | Sbjct 1164 ATTGTACGCTGTGAGATTTCCCAGACAGTTTTATACAGAGCTTTGGTTTCGGCAGGGATA 1223 Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104 || | ||||||| ||||| |||||||| ||||| | || || || | ||| | Sbjct 1224 TTCGATATATTCTGTATAGAGCCACCATCGGAGATAATACGGTTTTTCATATTATCCGAC 1283 Query 53105 CATAAT----TTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 53160 || || | ||| | | | || | || || ||||| || | |||||| || Sbjct 1284 CACAAGCCCATGTCTACCAGGT----CTTTGAGAAGCCAGGGATTTACAATTTGAAACTC 1339 Query 53161 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 53220 ||||| ||| || | || | ||| || || |||||| ||||| | | |||||||| Sbjct 1340 TCCAGCCAAAACACGACGGGAGTATATGTTGGAGGTATATGGTTCAAAACACTCATTAAA 1399 Query 53221 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 53280 ||| | ||||||| ||| ||||||||||||||| || || | |||||||| | ||| Sbjct 1400 TCCAAGAATTTGACTAGTGCTTGCAGTCGGCATAGGAGCTACAAGCAAACTATTACGAAG 1459 Query 53281 ACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAAC 53340 ||||| || |||| | | |||||| || ||||| | ||| | || | ||| ||| Sbjct 1460 CCCGTACATTTTGATCTCAGCTTTTAAAGAATCCCAGTCCCATAAGTCTGTGGGTGTAAC 1519 Query 53341 NNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTA 53400 ||| || || || |||| || || | || || || || Sbjct 1520 ACCCCACATATCATATTGAAGCTCGCCTTTCGAGGCGGGAGAGCCCTCGTAAGTCTCATA 1579 Query 53401 TGGTCCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAATGGTT 53458 | || || | ||| | ||| ||| | ||| ||| | | ||| || ||| Sbjct 1580 AGTGCCCAGTTTTTTAGCCAAGTCA--ACTGATGAGGTTAAGGCAGCATGATATATAGTT 1637 Query 53459 TCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGA 53518 || ||||||| |||||| |||| || ||| || || || ||||| || | ||| Sbjct 1638 TCAAAGATCTGCTTATTGAGATGTTTTGCCTCTTGGGAGTCGAATGGCAAACGCA-GAGC 1696 Query 53519 -ATAAACGCGTCTGCTAATCCTTGAACACCAATACCG--ATAGGTCTATGTCTCTTATTA 53575 | ||| | || |||| ||||| || || ||||| ||||||| ||| | |||| Sbjct 1697 CAAAAATACATCCGCTAGACCTTGGACTCC--TACCGCAATAGGTCGATGGCGAAAATTA 1754 Query 53576 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTG 53635 | |||||| |||| ||||| || |||| || |||||||| || ||||| || Sbjct 1755 CTCTTACGAGCTTCAGGAACCGGATAGTAGTTAACGTCAATAATTTTGTTAAGGTTCCTA 1814 Query 53636 ACAATTACTTTGACC-ACATCCTTCAGTTTGAGAAAATCAAAT-TGTCCATCTAT----- 53688 || | || | ||| || || | ||||| |||||||||| |||| | | | Sbjct 1815 ACTACAACCT-GACAGACCTCATGAAGTTTACGAAAATCAAAAGTGTCATTGTTTGTGTT 1873 Query 53689 TACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 53748 |||| | || || ||| | |||||||| ||| || || ||||| |||| | | | Sbjct 1874 TACATATGTGGGCAGTGCTAGAGATGCCAAATTGCACACAGCTACTTCATCTGGAGATGA 1933 Query 53749 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATT 53808 |||| | ||| || |||||||| ||| | ||| || || | |||| ||||| Sbjct 1934 GTATTCAACTATTTCGGTGCAAAGGTTAGAGCTGCGGATAGTCCCGAGGTTTTTCTGATT 1993 Query 53809 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGA 53868 ||| || ||||| || ||||| || ||||| || || || ||||| |||||| | || | Sbjct 1994 ACTTTTCTTGTTGCAAGCATCTTTGTAAAGCATAAACGGAGTACCGGTTTCAGTTTGTGC 2053 Query 53869 TTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTT---TTC 53925 ||| | |||| | ||| | | ||| || || | | || | || ||| Sbjct 2054 TTCAACTATCGAGTACCATAGCTTTTGTGCC---ATAATGGTTCTGCGACCTTTACCTTC 2110 Query 53926 TCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGG 53985 | ||| || ||| || ||||| || || || |||||| | || ||||| Sbjct 2111 TTGTTCATACTTCTCATATAAAGCCTCAAATTCATCACCATAAACATCAGCTAAACCAGG 2170 Query 53986 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 54045 ||||||| || ||||| | | ||| || || | | | |||| |||||||| || Sbjct 2171 ACATTCACATGGGCACATAAGAGTCCATTCCCCATTTTTTTCAACTCTCTTCATAAAAAG 2230 Query 54046 ATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 54104 |||||| ||||| | || ||| |||||||| | | | ||| || || || || Sbjct 2231 ATCAGGTATCCATA-AGGCATAGAATAGATCACGAGCGCGGACTTCTTCTTTACCATGAT 2289 Query 54105 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCA 54164 |||| ||||| || || | | || || | |||||| || || |||||||| | | Sbjct 2290 TCTTCCGGAGATCAAGAAATTCAAATATGTCTGCATGCCATGGCTCTAAGTATATAGCGA 2349 Query 54165 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 54224 | || || || || || || || || || | |||||||||||| || ||| | |||| Sbjct 2350 AGGCACCTGGACGCTTATTGCCACCTTGGTCAACGTATCTAGCGGTATTGTTAAAGACTC 2409 Query 54225 TCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGG 54284 | |||||| | ||| |||||||| ||||| || || | ||||||| || | | Sbjct 2410 GAAGCATTGGCACAATTCCATTGGAGTTTCCATTCGTTCCAGCGATATAGGCGCCTGTCG 2469 Query 54285 CACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATC 54344 |||| ||| | || |||||| || || || || |||| || || | |||||| Sbjct 2470 CACGGATACGATGTATATTTAGACCAATACCACCGGCATTTTTGGATATCATTGCGCACG 2529 Query 54345 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 54404 |||||| ||||| ||||| || || |||||||| ||| |||||| || ||||||||| Sbjct 2530 TTTTTAAAGTATCGTAGATTCCATCAATACTATCCTCCTTCATGTCAATTAGAAAACATG 2589 Query 54405 TAGACATTTGGTGA-CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 54463 ||| | | |||| | ||||| ||| |||||| ||||| || || |||||||| Sbjct 2590 AAGAAAGCT-GTGATTGTGGGGTTCCAGCAGCAAATAATGTAGGCGATGCATGCGTAAAA 2648 Query 54464 CATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATT 54523 |||| | || | | || || ||||| ||||| || || || || ||| ||||| Sbjct 2649 TATTTATTGGACATCAAGTTATATGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATC 2708 Query 54524 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTC 54583 || || || |||||||||| ||| || || || | || || ||||| | || | Sbjct 2709 CCGACAGCAACACGCATTATCATATGTTGGGGCCGCTCCACAATCTTATCATTGAGCCGA 2768 Query 54584 AGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 54621 || | || ||| |||||| || || || |||||||| Sbjct 2769 AGAAGATATGATCTTTCCAGCGTCTTGAAGCCAAAATA 2806 >seq7170 Length=2695 Score = 136 bits (150), Expect = 5e-27 Identities = 231/334 (69%), Gaps = 3/334 (1%) Strand=Plus/Minus Query 24355 TTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAA 24414 |||| || || ||||||||||| ||| |||| | | ||||| | ||| ||||| | Sbjct 1155 TTGTTTCAATGGCATTAAAGAGGTAGGTTTTCTGAGATTGTTCTTTGATATAGGTATCGA 1096 Query 24415 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAAC 24474 |||| || || | || || ||||| ||||| || || || ||||| || || Sbjct 1095 TCAACAGGGAGTAAGTCTCAGAGTGAATATTTTCCATCATTATCTGGAATCCATAAAAGA 1036 Query 24475 ATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTA 24534 ||| || || | |||||||||||| ||| || ||||| | | ||| || || || | Sbjct 1035 ATCGTGCTTCAGGAATCTGTACTTCGCTACTGAAGCGTTCGACAAGATTCTCGTTGACAA 976 Query 24535 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 24594 ||||||| ||||| ||||| || | ||| || ||||||||| || || Sbjct 975 TTCCGTCTGATGCTGCGAAAAATGCAAGTACGTGAGATATAAAATAACGCTCATCATCAT 916 Query 24595 TTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 24651 | ||| |||||||| || | | |||||| || | ||| | |||||| | ||||||| Sbjct 915 TCAGTCTGTTATTCCAGTCGTGTAGATCTTTGGAAAGATCAATTTCTTCTGCAGTCCAAA 856 Query 24652 ATGATGCCTCTGCCTTTTTATACATATTCCAGAT 24685 | |||||||| ||||| || ||||| | ||| || Sbjct 855 AGGATGCCTCGGCCTTCTTGTACATTTGCCATAT 822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593527586624160