Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000214055.1_202011-02-23] 26,142 sequences; 41,448,213 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq9397 89.7 5e-13 seq3891 89.7 5e-13 seq7170 87.8 2e-12 >seq9397 Length=1229 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || ||||| | || ||||| || || || | || || ||| | | Sbjct 1156 AATGCAAATTTTTGTCAAAACCTTAACCGGCAAGACAATAACACTAGAGGTAGAATCATC 1097 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||||| | | |||| | ||| ||||| | || ||||| |||||||| |||| | Sbjct 1096 CGACACAATAGACAACG-TAAAGAGTAAAATCCAGGATAAAGAAGGCATCCCACCGGATC 1038 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | ||| || | || | ||||| || ||||| || || | |||||| || || ||||||| Sbjct 1037 AACAAAGATTGATATTTGCGGGAAAGCAGCTTGAAGATGGGCGCACACTAAATGACTACA 978 Query 40868 ACATCCAGAAGGAGGCCACGCTGCAT 40893 |||| || || || | || || ||| Sbjct 977 ACATTCAAAAAGAATCAACTCTTCAT 952 >seq3891 Length=3267 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || |||||||| || || || || | || || ||| | | Sbjct 1826 ATGCAAATTTTCGTGAAGACCCTCACGGGTAAGACTATTACACTTGAGGTGGAATCATCA 1767 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| |||||| | || |||||||| || ||| | ||||| Sbjct 1766 GACACTATCGATAATGTCAAATCAAAAATCCAAGATAAAGAGGGTATTCCCCCTGACCAA 1707 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| | || | ||||| |||||||| || || | |||||| | || |||||| Sbjct 1706 CAACGTTTGATTTTTGCGGGTAAACAGCTTGAGGATGGCCGCACCTTATCTGATTACAAC 1647 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||| || || | || || ||||| || Sbjct 1646 ATCCAAAAAGAATCAACCCTTCATCTCGT 1618 >seq7170 Length=2695 Score = 87.8 bits (96), Expect = 2e-12 Identities = 174/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || || ||||| | || || | || || Sbjct 822 ATATGGCAAATGTACAAGAAGGCCGAGGCATCCTTTTGGACTGCAGAAGAAATTGATCTT 881 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||| || ||||||| | | |||| || | ||||| |||| || Sbjct 882 TCCAAAGATCTACACGACTGGAATAACAGACTGAATGATGATGAGCGTTATTTTATATCT 941 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || |||||||| || ||||| || |||||||||||||| ||||| || Sbjct 942 CACGTACTTGCATTTTTCGCAGCATCAGACGGAATTGTCAACGAGAATCTTGTCGAACGC 1001 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | || || ||| | | || || || | ||| || || || ||||| ||| Sbjct 1002 TTCAGTAGCGAAGTACAGATTCCTGAAGCACGATTCTTTTATGGATTCCAGATAATGATG 1061 Query 116873 GAGAACGTGCACTCGGA 116889 || || | ||||| || Sbjct 1062 GAAAATATTCACTCTGA 1078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515050839245920