Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000214055.1_202011-02-23] 26,142 sequences; 41,448,213 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq6804 235 5e-57 seq7170 98.7 9e-16 >seq6804 Length=2818 Score = 235 bits (260), Expect = 5e-57 Identities = 1181/1855 (64%), Gaps = 61/1855 (3%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 ||||| ||||| | |||||| ||||| | | || | | ||||||||| || || Sbjct 978 TCAACAGTGAACTGAATAGGAGCAGATGCAGCCATAGTCCGTAAATAATACATGCCGGTC 1037 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATG-TAGGATT 36908 |||| |||| | |||| ||| ||| |||||||| || | |||||| ||| | |||| Sbjct 1038 TTTAAGCCCAGTTTCCAGCCGGCAAAGTGCATACTTGTAA-TTTTGCCCATGGTTGGATC 1096 Query 36909 ATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCAT 36968 | | | || ||||||| || ||||| ||||| ||||| | || || ||||| Sbjct 1097 CTTCAAGTGGATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCAT 1156 Query 36969 TTCTAAAATACATTTT----TGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATAT 37024 || || || || | || || || ||||| || |||||||| | ||| | | Sbjct 1157 --CTGAATTA--TTGTACGCTGTGAGATTTCCCAGACAGTTTTATACAGAGCTTTGGTTT 1212 Query 37025 TATCTGGTAAATC---TAAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTA 37081 | || | || || || || ||||| ||| || | | ||| || || | Sbjct 1213 CGGCAGGGATATTCGATATATTCTGTATAGAGCCACCATCGGAGATAATACGGTTTTTCA 1272 Query 37082 TGTCATTATTCCACAT----ATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACA 37137 | | || ||||| || ||||| || ||| | | || ||||||||| Sbjct 1273 TATTATCCGACCACAAGCCCATGTCTACC----AGGTCTTTGAGAAGCCAGGGATTTACA 1328 Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 | ||||| ||||||| || || | | | ||||| ||| ||||||||||||| Sbjct 1329 ATTTGAAACTCTCCAGCCAAAACACGACGGGAGTATATGTTGGAGGTATATGGTTCAAAA 1388 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 |||||||| | | |||||| || |||||| ||||| || |||| || | Sbjct 1389 CACTCATTAAATCCAAGAATTTGACTAGTGCTTGCAGTCGGCATAGGAGCTACAAGCAAA 1448 Query 37258 CTATTTCTCAATCCATGTGTATTAATTCTCTT-TTTTAGTTCATTCCAATCCCATAAATC 37316 ||||| | | || | | || || ||| ||||| || ||| |||||||| || Sbjct 1449 CTATTACGAAGCCCGTACATTTTGAT-CTCAGCTTTTAAAGAATCCCAGTCCCATAAGTC 1507 Query 37317 TGTTGGGTTCTTTAAC----CACATATCATATTGTAGAATACCTTTACTCGCTGGAGAAT 37372 ||| || | |||| |||||||||||||| || ||||| || ||||| Sbjct 1508 TGTGGG----TGTAACACCCCACATATCATATTGAAGCTCGCCTTTCGAGGCGGGAGAGC 1563 Query 37373 CGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTA--GATTCTAGTGC 37430 | | || |||||||||| || ||||||| | || |||| || || || Sbjct 1564 CCTCGTAAGTCTCATAAGTGCCCAGTTTTTTAGCCAAGTC--AACTGATGAGGTTAAGGC 1621 Query 37431 GGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAA 37490 |||| |||||| ||||| || || || |||| | |||||| |||| | ||||| Sbjct 1622 AGCATGATATATAGTTTCAAAGATCTGCTTATTGAGATGTTTTGCCTCTTGGGAGTCGAA 1681 Query 37491 TGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCT 37550 || | | || | ||| ||||| || | ||| || || || | | || |||| Sbjct 1682 TGGCAAACGCAGAGCCAAAAATACATCCGCTAGACCTTGGACTCCTACCGCAATAGGTCG 1741 Query 37551 ATGTTTCTTATTAGATCTAGACGA--TTCTATCACTGGATAATAATTGATATCTATTATT 37608 ||| |||| ||| |||| ||| || ||||| || || | || || ||| Sbjct 1742 ATGGCGAAAATTAC-TCTT-ACGAGCTTCAGGAACCGGATAGTAGTTAACGTCAATAATT 1799 Query 37609 TTATTTAGATTTTTAACTAGTATTTTCGTAATTATTC-TCAACTTGTCGAACATAAATAC 37667 || || || || |||||| | | | | || | || || |||| || || | Sbjct 1800 TTGTTAAGGTTCCTAACTACAACCT--GACAGACCTCATGAAGTTTACGAAAATCAAAAG 1857 Query 37668 -------GTTATTATTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAA 37720 ||| | || ||| || | || | | |||| | | ||| || ||||| | Sbjct 1858 TGTCATTGTTTGTGTTTACATATGTGGGCAGTGCTAGAGATGCCAAATTGCACACAGCTA 1917 Query 37721 CTTCATCTTCGTTACTAA-ATTGTATAATCTCTGTACAGAGATTACTCGATCTA---ATT 37776 |||||||| | | | ||| | || || || || || ||| || || || Sbjct 1918 CTTCATCTG-GAGATGAGTATTCAACTATTTCGGTGCAAAGGTTA---GAGCTGCGGATA 1973 Query 37777 GTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGC 37836 || || | || | ||||| ||| || || |||| |||||| || || ||| |||| Sbjct 1974 GTCCCGAGGTTTTTCTGATTACTTTTCTTGTTGCAAGCATCTTTGTAAAGCATAAACGGA 2033 Query 37837 GTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATC 37896 || || ||| |||| || || | || || | ||||| || ||| ||| | | Sbjct 2034 GTACCGGTTTCAGTTTGTGCTTCAACTATCGAGTACCATAGCTTTTGTGCCATAATGGTT 2093 Query 37897 GCTTTAAtttttttCTTTGT-TTCGTA-TTCTATATATAATTTGTTAAAATCATTCCCCC 37954 || | ||| ||| | ||| || |||| |||||| | ||| |||| || Sbjct 2094 -CTGCGACCTTTACCTTCTTGTTCATACTTCTC-ATATAAAGCCTCAAATTCATCACCAT 2151 Query 37955 ATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTT 38014 | ||||| ||| || |||||||| ||||| ||||| |||| |||||| ||| ||||| Sbjct 2152 AAACATCAGCTAAACCAGGACATTCACATGGGCACATAAGAGTCCATTCCCCATTTTTTT 2211 Query 38015 CTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTAT 38074 | || | | |||||| | |||||||| |||||| ||| |||| ||| | | Sbjct 2212 CAACTCTCTTCATAAAAAGATCAGGTATCCATAAGGCATAGAATAGATCACGAGCGCGGA 2271 Query 38075 ATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATG 38134 |||||| || || |||||| | | ||||| || ||||| || || ||||||| Sbjct 2272 CTTCTTCTTTACCATGATTCTTCCGGAGATCAAGAAATTCAAATATGTCTGCATGCCATG 2331 Query 38135 GTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAA 38194 | |||| || || | | || ||||| | |||| || || || | || |||||| Sbjct 2332 GCTCTAAGTATATAGCGAAGGCACCTGGACGCTTATTGCCACCTTGGTCAACGTATCTAG 2391 Query 38195 CTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGG 38254 | || || ||| | | || | ||| || || || ||||| || || || || | || | Sbjct 2392 CGGTATTGTTAAAGACTCGAAGCATTGGCACAATTCCATTGGAGTTTCCATTCGTTCCAG 2451 Query 38255 ATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTT 38314 ||||| | || | || || ||| | ||| | || || ||||| |||| || Sbjct 2452 CGATATAGGCGCCTGTCGCACGGATACGATGTATATTTAGACCAATACCACCGGCATTTT 2511 Query 38315 TTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTA 38374 | ||||| | ||||| |||||| ||||| | || || || ||||| || ||||| | Sbjct 2512 TGGATATCATTGCGCACGTTTTTAAAGTATCGTAGATTCCATCAATACTATCCTCCTTCA 2571 Query 38375 TTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAG 38434 | | || |||||| ||| | || | ||| ||||| || ||||||||||| Sbjct 2572 TGTCAATTAGAAAACATGAAGAAAGCTGTGATTGTGGGGTTCCAGCAGCAAATAATGTAG 2631 Query 38435 GAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTA 38494 | |||||||| | || |||| | |||| | |||||||| ||||| || || | Sbjct 2632 GCGATGCATGCGTAAAATATTTATTGGACATCAAGTTATATGTCTCTATAGCAGATTCAA 2691 Query 38495 TATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTA 38554 | ||| | |||||| || | || || | ||||| ||||||||| || | || | | Sbjct 2692 TGTCATCTTGGTGAATCCCGACAGCAACACGCATTATCATATGTTGGGGCCGCTCCACAA 2751 Query 38555 TTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATA 38609 | |||| ||| | ||| ||||| ||| |||| | || || | |||||||| Sbjct 2752 TCTTATCATTGAGCCGAAGAAGATATGATCTTTCCAGCGTCTTGAAGCCAAAATA 2806 >seq7170 Length=2695 Score = 98.7 bits (108), Expect = 9e-16 Identities = 564/904 (62%), Gaps = 70/904 (8%) Strand=Plus/Minus Query 11338 CTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATA 11397 ||||||||| || | ||| || |||||| ||||| ||||| || | | || || | Sbjct 1716 CTTTTGATAATCGCCAACACGCTTTTCGAAGAAATTTGTCTTCCCAGCCAAGGAGATGTT 1657 Query 11398 CTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAA 11457 ||||| ||| || |||||| | ||| | || ||| | ||||| | | Sbjct 1656 TTCCATGAAGTCGAACGGATTAGTAGCCTTGTAAACCTTTGGATTTCCTAATGATAGCAG 1597 Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAG 11517 |||| |||||| || ||||| || ||||| ||||| |||||||||| | || Sbjct 1596 CAATCGATCTGCAACAAATTCGATGTACTGCTTCATTAGGGTGGAATTCATACCAAGTAG 1537 Query 11518 ATC-CACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTA 11576 | || | ||| ||| | || || ||||| | |||||| | || || | | || Sbjct 1536 TGCACAAGGTAAT-GCATCAGTTAAGAACTCTTGTTCTATTTCTACTGCTTGCGT---TA 1481 Query 11577 TCGACGTTATAA----CTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACAC 11632 || |||| | | ||| || |||||| || |||||| || | | || Sbjct 1480 TC-ACGTCTTGAACGGCTTGTTTTGATGGTCTGTGCTTCAAATGTGAGAAGAGAAGGCAA 1422 Query 11633 GCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCG 11692 ||||| || |||| |||||| || | |||| |||||| ||||| ||||| || Sbjct 1421 GCAAAGTCCGTGTGTAGACCTTCATCACGTGAAATTAATTCATTTGAAAACGTTAACCCA 1362 Query 11693 GGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATT 11752 | ||| | ||||||||| || | ||| || || | ||| ||||| ||| || ||||| Sbjct 1361 GCCATAAGTCCTCGTTTCTTCAGCCAGAAAATTGAAGCGAATGATCCACTGAAAAATATC 1302 Query 11753 CCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTGCTAGAT-----A 11807 ||||| ||||||||||| || || | | || |||| | ||| || || | Sbjct 1301 CCCTCGACAGCTGCAAAAGCCACAAGACGTTGTCCAAAGG--TTGACTCTTTATCTTCGA 1244 Query 11808 TCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCA--------------------TT- 11846 ||||| ||||| || ||||| ||||| | ||| || Sbjct 1243 TCCATCGCACAGCCCAGTCTGCTTTTTTTTTAATGCAGGGAACTGGGAACGGTTAGTTTA 1184 Query 11847 --CCA-----------------------TTGTTTCTATAGCGTTAAATAAATGCATTTTT 11881 ||| ||||||| || || ||||| | | | ||| Sbjct 1183 GGCCAGCTCATCGAAGGGGGAGAGTTACTTGTTTCAATGGCATTAAAGAGGT--AGGTTT 1126 Query 11882 TCT-ATATTAT-CTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATAT 11939 ||| | ||| | || | | ||| ||||| || || | || | || || ||||||| Sbjct 1125 TCTGAGATTGTTCTTTGATATAGGTATCGATCAACAGGGAGTAAGTCTCAGAGTGAATAT 1066 Query 11940 TTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACATCCACAT 11999 ||||||| ||| || |||||||| || ||||||| || | | |||||| || | Sbjct 1065 TTTCCATCATTATCTGGAATCCATAAAAGAATCGTGCTTCAGGAATCTGTACTTCGCTAC 1006 Query 12000 AAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTA 12059 || | ||| | | |||||| || ||||| || || | ||| |||||||| |||| Sbjct 1005 TGAAGCGTTCGACAAGATTCTCGTTGACAATTCCGTCTGATGCTGCGAAAAATGCAAGTA 946 Query 12060 TATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT---TTATCCCAATCATCTAAATCTT 12116 || |||||| || || || | | | | | |||| ||| || | || ||||| Sbjct 945 CGTGAGATATAAAATAACGCTCATCATCATTCAGTCTGTTATTCCAGTCGTGTAGATCTT 886 Query 12117 TTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCC 12176 | || | ||| | |||||| | |||||||| |||| | | | || ||||||| || Sbjct 885 TGGAAAGATCAATTTCTTCTGCAGTCCAAAAGGATGCCTCGGCCTTCTTGTACATTTGCC 826 Query 12177 AGAT 12180 | || Sbjct 825 ATAT 822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468371697808480