Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000214055.1_202011-02-23] 26,142 sequences; 41,448,213 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq9397 159 8e-34 seq3891 138 3e-27 seq7170 125 2e-23 seq6720 123 6e-23 >seq9397 Length=1229 Score = 159 bits (176), Expect = 8e-34 Identities = 182/241 (76%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 104323 TTTATTTATT--CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATA 104380 |||||||| | || ||||| || | |||||| | ||| | || |||||||| ||||| Sbjct 917 TTTATTTACTTGCCACCTCTGAGACGAAGTACCAAATGAAGAGTTGATTCTTTTTGAATG 976 Query 104381 TTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGT 104440 || |||||| ||| || | || ||||| || || ||||| ||||| || | || ||| Sbjct 977 TTGTAGTCATTTAGTGTGCGCCCATCTTCAAGCTGCTTTCCCGCAAATATCAATCTTTGT 1036 Query 104441 TGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTCTACGGTATC 104499 ||||| || || || |||||||||||||| || ||| || ||||| || |||| || || Sbjct 1037 TGATCCGGTGGGATGCCTTCTTTATCCTGGAT-TTTACTCTTTACGTTGTCTATTGTGTC 1095 Query 104500 GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | | ||||||||||||||| || ||||| || || | ||||| ||||| || ||||| Sbjct 1096 GGATGATTCTACCTCTAGTGTTATTGTCTTGCCGGTTAAGGTTTTGACAAAAATTTGCAT 1155 Query 104560 T 104560 | Sbjct 1156 T 1156 >seq3891 Length=3267 Score = 138 bits (152), Expect = 3e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 104324 TTATTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTA 104383 || ||| |||||| | || | |||||| ||||| | || |||||||| || || || Sbjct 1591 TTCTTTGCTCCCCCACGAAGGCGAAGTACGAGATGAAGGGTTGATTCTTTTTGGATGTTG 1650 Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443 || ||||||| || | || || || || ||||| || |||||||| | | ||||| Sbjct 1651 TAATCAGATAAGGTGCGGCCATCCTCAAGCTGTTTACCCGCAAAAATCAAACGTTGTTGG 1710 Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503 ||||| || || || |||||||| || || |||| ||| ||||| || | || || Sbjct 1711 TCAGGGGGAATACCCTCTTTATCTTGGATTTTTGATTTGACATTATCGATAGTGTCTGAT 1770 Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||| ||||| ||||||||||||||||| || || || || || || || ||||| Sbjct 1771 GATTCCACCTCAAGTGTAATAGTCTTACCCGTGAGGGTCTTCACGAAAATTTGCAT 1826 >seq7170 Length=2695 Score = 125 bits (138), Expect = 2e-23 Identities = 202/291 (69%), Gaps = 11/291 (4%) Strand=Plus/Plus Query 268733 ATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTG 268792 |||||| |||||||| |||||| || || |||||||||| ||||||| | ||||| Sbjct 822 ATATGGCAAATGTACAAGAAGGCCGAGGCATCCTTTTGGACTGCAGAAGAAATTGATCTT 881 Query 268793 TCTTATGACTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGA-------TTTAT 268845 || | || || || ||||| || | | ||| | || || ||||| Sbjct 882 TCCAAAGATCTACACGACTGGAATAACAGA----CTGAATGATGATGAGCGTTATTTTAT 937 Query 268846 ATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGA 268905 |||| | | ||||| ||||| |||| || || || || ||||| ||||| || || Sbjct 938 ATCTCACGTACTTGCATTTTTCGCAGCATCAGACGGAATTGTCAACGAGAATCTTGTCGA 997 Query 268906 GAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGC 268965 ||| || || ||||||||||||||||| ||| ||||| |||||||||||| Sbjct 998 ACGCTTCAGTAGCGAAGTACAGATTCCTGAAGCACGATTCTTTTATGGATTCCAGATAAT 1057 Query 268966 TATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATAT 269016 || ||||||||||| || |||| ||| || || || ||||| ||||| Sbjct 1058 GATGGAAAATATTCACTCTGAGACTTACTCCCTGTTGATCGATACCTATAT 1108 >seq6720 Length=2861 Score = 123 bits (136), Expect = 6e-23 Identities = 127/166 (77%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 |||| ||||||||||| ||||| || || | || ||||| |||||||| ||||| |||| Sbjct 943 CTTTTTGAATATTATAATCAGAAAGCGTACGCCCATCTTCGAGTTGTTTGCCAGCGAAAA 884 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | | | |||||| || ||||| |||||||| || || |||||||| ||||| ||||| | Sbjct 883 TCAATCGCTGTTGGTCCGGAGGAATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTAT 824 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 | | |||||| | || ||||| ||||| || || || || || Sbjct 823 CGATAGTATCGGAGGACTCGACCTCAAGTGTGATTGTTTTGCCCGT 778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151012745582536