Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000214055.1_202011-02-23] 26,142 sequences; 41,448,213 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3891 118 9e-22 seq6720 109 5e-19 seq9397 107 2e-18 >seq3891 Length=3267 Score = 118 bits (130), Expect = 9e-22 Identities = 157/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | || ||||| | || ||| | || ||||| || || Sbjct 1826 ATGCAAATTTTCGTGAAGACCCTCACGGGTAAGACTATTACACTTGAGGTGGAATCATCA 1767 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||||| |||| || |||||| || || ||||| || ||||| ||||| Sbjct 1766 GACACTATCGATAATGTCA---AATCAAAAATCCAA-GATAAAGAGGGTATTCCCCCTGA 1711 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| || | |||||||| || ||||| | || |||| ||||| | ||||| Sbjct 1710 CCAACAACGTTTGATTTTTGCGGGTAAACAGCTTGAGGATGGCCGCACCTTATCTGATTA 1651 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || ||||||||||| || || ||| | || || Sbjct 1650 CAACATCCAAAAAGAATCAACCCTTCATCTCGTACT 1615 >seq6720 Length=2861 Score = 109 bits (120), Expect = 5e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| || || || ||| | |||||| | || || ||||| || || |||||| Sbjct 763 TTCGTCAAGACCTTAACGGGCAAAACAATCACACTTGAGGTCGAGTCCTCCGATACTATC 822 Query 25068 GAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || |||| || || | ||| ||||| ||||| ||||| || ||||||||||| | Sbjct 823 GATAATGTGAAAGCCAAGATTCAA-GACAAGGAAGGAATTCCTCCGGACCAACAGCGATT 881 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 ||||| || ||||||||| | ||||||| || || | ||||| ||||||||||| Sbjct 882 GATTTTCGCTGGCAAACAACTCGAAGATGGGCGTACGCTTTCTGATTATAATATTCAAAA 941 Query 25187 AG 25188 || Sbjct 942 AG 943 >seq9397 Length=1229 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| || || || ||||| || | || ||| | || || || || || Sbjct 1156 AATGCAAATTTTTGTCAAAACCTTAACCGGCAAGACAATAACACTAGAGGTAGAATCATC 1097 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| |||||| || |||||||| || ||||| || || Sbjct 1096 CGACACAATAGACAACGTAAAGAGTAAAATCCAGGATAAAGAAGGCATCCCACCGGATCA 1037 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | || ||||| || || || | ||||||| ||||| | || ||||| Sbjct 1036 ACAAAGATTGATATTTGCGGGAAAGCAGCTTGAAGATGGGCGCACACTAAATGACTACAA 977 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 |||||||||||||| || || ||||| || || | || ||||| || || || Sbjct 976 CATTCAAAAAGAATCAACTCTTCATTTGGTACTTCGTCTCAGAGGTGGCAAGTA 923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433189939261730