Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000214055.1_202011-02-23] 26,142 sequences; 41,448,213 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq9397 131 4e-25 seq3891 118 3e-21 seq6720 111 4e-19 seq7170 89.7 1e-12 >seq9397 Length=1229 Score = 131 bits (144), Expect = 4e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | |||||| | ||||| || ||||||||| || || ||||| Sbjct 929 CCACCTCTGAGACGAAGTACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCATTT 988 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || ||||| || || |||| | |||||| |||| Sbjct 989 AGTGTGCGCCCATCTTCAAGCTGCTTTCCCGCAAATATCAATCTTTGTTGATCCGGTGGG 1048 Query 288367 ATTCCTTCTTTATCCTGGATTTT-CGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || |||||||||||||||||||| | |||| ||||| ||||| | ||| |||||||| Sbjct 1049 ATGCCTTCTTTATCCTGGATTTTACTCTTT-ACGTTGTCTATTGTGTCGGATGATTCTAC 1107 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || ||||| ||||| | || ||||| || || |||||| Sbjct 1108 CTCTAGTGTTATTGTCTTGCCGGTTAAGGTTTTGACAAAAATTTGCATT 1156 >seq3891 Length=3267 Score = 118 bits (130), Expect = 3e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | |||||||||||||| || |||||||||||| || || || | Sbjct 1599 TCCCCCACGAAGGCGAAGTACGAGATGAAGGGTTGATTCTTTTTGGATGTTGTAATCAGA 1658 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | ||||| || || || | ||||| || || || |||| ||| ||||| | || Sbjct 1659 TAAGGTGCGGCCATCCTCAAGCTGTTTACCCGCAAAAATCAAACGTTGTTGGTCAGGGGG 1718 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || |||||||| |||||||| | ||| || || || |||| || ||||| || Sbjct 1719 AATACCCTCTTTATCTTGGATTTTTGATTTGACATTATCGATAGTGTCTGATGATTCCAC 1778 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || || || ||||| ||||| || ||||| Sbjct 1779 CTCAAGTGTAATAGTCTTACCCGTGAGGGTCTTCACGAAAATTTGCAT 1826 >seq6720 Length=2861 Score = 111 bits (122), Expect = 4e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 ||||||| |||||||| || | ||||| || || ||||| | |||||| || ||||| | Sbjct 943 CTTTTTGAATATTATAATCAGAAAGCGTACGCCCATCTTCGAGTTGTTTGCCAGCGAAAA 884 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 ||| |||||||| || |||||||| || || || || || |||||||| || | Sbjct 883 TCAATCGCTGTTGGTCCGGAGGAATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTAT 824 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 | |||| |||| || || || || || ||||| || || || || | |||||||||| Sbjct 823 CGATAGTATCGGAGGACTCGACCTCAAGTGTGATTGTTTTGCCCGTTAAGGTCTTGACGA 764 Query 288464 A 288464 | Sbjct 763 A 763 >seq7170 Length=2695 Score = 89.7 bits (98), Expect = 1e-12 Identities = 169/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 269092 ATAATGGAAGCAGTTACAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATG 269151 |||| | ||||||| || ||| |||||||| | ||| || | || ||| | | Sbjct 1480 ATAACGCAAGCAGTAGAAATAGAACAAGAGTTCTTAACTGATGCATTACCTTGTGCACTA 1539 Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 | ||||||||| || || ||||| || || |||||||| || || ||||| | | Sbjct 1540 CTTGGTATGAATTCCACCCTAATGAAGCAGTACATCGAATTTGTTGCAGATCGATTGCTG 1599 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 || | || || || || ||||| | | ||||| |||| ||| |||||| Sbjct 1600 CTATCATTAGGAAATCCAAAGGTTTACAAGGCTACTAATCCGTTCGACTTCATGGAAAAC 1659 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCT 269331 || || | | || ||||| || ||||||||||||||||| |||| |||||| || Sbjct 1660 ATCTCCTTGGCTGGGAAGACAAATTTCTTCGAAAAGCGTGTTGGCGATTATCAAAAGGCT 1719 Query 269332 GGTGTAATG 269340 ||||| ||| Sbjct 1720 GGTGTTATG 1728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179259281394276