Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000214055.1_202011-02-23] 26,142 sequences; 41,448,213 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq9397 111 1e-19 seq3891 107 2e-18 seq9398 89.7 5e-13 seq6720 84.2 2e-11 >seq9397 Length=1229 Score = 111 bits (122), Expect = 1e-19 Identities = 171/240 (71%), Gaps = 3/240 (1%) Strand=Plus/Plus Query 45103 TTTATTTTATT-CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATA 45161 ||||||| || || || | ||| | | || | ||| || |||||||| ||||| || Sbjct 917 TTTATTTACTTGCCACCTCTGAGACGAAGTACCAAATGAAGAGTTGATTCTTTTTGAATG 976 Query 45162 TTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGC 45221 || || || | | || ||| || | || ||||| || ||||||||| ||| Sbjct 977 TTGTAGTCATTTAGTGTGCGCCCATCTTCAAGCTGCTTTCCCGCAAATATCAATCTTTGT 1036 Query 45222 TGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTC 45280 || ||||| || |||||||||||||| || ||||| || | || | |||| ||||| Sbjct 1037 TGATCCGGTGGGATGCCTTCTTTATCCTGGATTTTACTCTTTA-CGTTGTCTATTGTGTC 1095 Query 45281 GGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || || || || || | || |||||||||| ||||| |||||||||||||| Sbjct 1096 GGATGATTCTACCTCTAGTGTTATTGTCTTGCCGGTTAAGGTTTTGACAAAAATTTGCAT 1155 >seq3891 Length=3267 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || |||||||| |||||||| || ||||| | ||| ||| || Sbjct 1618 ACGAGATGAAGGGTTGATTCTTTTTGGATGTTGTAATCAGATAAGGTGCGGCCATCCTCA 1677 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||||| || || | ||||| ||||| ||||| || ||||| || ||||||||||| Sbjct 1678 AGCTGTTTACCCGCAAAAATCAAACGTTGTTGGTCAGGGGGAATACCCTCTTTATCTTGG 1737 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 |||||| ||||| || | ||||| || || || || || || |||| || || Sbjct 1738 ATTTTTGATTTGACATTATCGATAGTGTCTGATGATTCCACCTCAAGTGTAATAGTCTTA 1797 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||||||||| Sbjct 1798 CCCGTGAGGGTCTTCACGAAAATTTGCAT 1826 >seq9398 Length=786 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 45194 TTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAAT 45253 |||||| || || | ||||||| ||| |||||||| || |||||||| |||||||| || Sbjct 8 TTGTTTACCAGCAAAGATCAATCTTTGTTGGTCCGGTGGGATGCCTTCCTTATCTTGGAT 67 Query 45254 TTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGC 45312 || ||| | || | || | ||||||||||||||||| || || |||| ||||| | Sbjct 68 CTTGCTTTTTA-CGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGGGTAATGGTTTTAC 126 Query 45313 CGGTTA 45318 | |||| Sbjct 127 CAGTTA 132 >seq6720 Length=2861 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 45153 TTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATC 45212 ||||| ||||||||||| | || ||| || | |||||| || ||| | ||| Sbjct 941 TTTTGAATATTATAATCAGAAAGCGTACGCCCATCTTCGAGTTGTTTGCCAGCGAAAATC 882 Query 45213 AATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCT 45272 ||||| || |||||||| ||||| ||||| || |||||||| || ||| | || Sbjct 881 AATCGCTGTTGGTCCGGAGGAATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTATCG 822 Query 45273 ACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAA 45331 | || ||||| |||||||| || || || | |||||||| |||| || || || || Sbjct 821 ATAGTATCGGAGGACTCGACCTCAAGTGTGATTGTTTTGCCCGTTAAGGTCTTGACGAA 763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451855496654320