Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000214055.1_202011-02-23] 26,142 sequences; 41,448,213 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq9397 105 7e-18 seq3891 104 2e-17 >seq9397 Length=1229 Score = 105 bits (116), Expect = 7e-18 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || ||||| | || ||||| || || || | || || || | | Sbjct 1156 AATGCAAATTTTTGTCAAAACCTTAACCGGCAAGACAATAACACTAGAGGTAGAATCATC 1097 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 ||||| | | |||| |||||| ||||||| || ||||| || || || | || Sbjct 1096 CGACACAATAGACAACG--TAAAGAGTAAAATCCAGGATAAAGAAGGCATCCCACCGGAT 1039 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| | | || | ||||| || ||||| || || | |||||| || || |||||| Sbjct 1038 CAACAAAGATTGATATTTGCGGGAAAGCAGCTTGAAGATGGGCGCACACTAAATGACTAC 979 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| ||||| ||| | || || |||||||| || ||| | ||||| ||| Sbjct 978 AACATTCAAAAAGAATCAACTCTTCATTTGGTACTTCGTCTCAGAGGTGGC 928 >seq3891 Length=3267 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || |||||||| || || || || | || || || | | Sbjct 1826 ATGCAAATTTTCGTGAAGACCCTCACGGGTAAGACTATTACACTTGAGGTGGAATCATCA 1767 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | ||| |||||||| || |||||||| |||||| | |||||| Sbjct 1766 GACACTATCGATAATGTCAAATCAAAAATCCAAGATAAAGAGGGTATTCCCCCTGACCAA 1707 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | |||| ||||| |||||||| || || | |||||| | || |||||| Sbjct 1706 CAACGTTTGATTTTTGCGGGTAAACAGCTTGAGGATGGCCGCACCTTATCTGATTACAAC 1647 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||| ||| | || || ||| | || || || Sbjct 1646 ATCCAAAAAGAATCAACCCTTCATCTCGTACTTCG 1612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500009356033280