Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000214055.1_202011-02-23] 26,142 sequences; 41,448,213 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq9397 125 1e-23 seq6720 111 3e-19 seq3891 109 1e-18 seq9398 100 5e-16 >seq9397 Length=1229 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 ||||| | |||||||| | |||||||||| ||| | || | ||||| ||| || Sbjct 920 ATTTACTTGCCACCTCTGAGACGAAGTACCAAATGAAGAGTTGATTCTTTTTGAATGTTG 979 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || || | ||| || | || ||||| ||||| || ||||| |||||| Sbjct 980 TAGTCATTTAGTGTGCGCCCATCTTCAAGCTGCTTTCCCGCAAATATCAATCTTTGTTGA 1039 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || ||||||||||| || ||||| | |||| || || || ||||| Sbjct 1040 TCCGGTGGGATGCCTTCTTTATCCTGGATTTTACTCTTTACGTTGTCTATTGTGTCGGAT 1099 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || || ||||| ||||| || || || |||| ||||| ||||| ||||||||| Sbjct 1100 GATTCTACCTCTAGTGTTATTGTCTTGCCGGTTAAGGTTTTGACAAAAATTTGCATT 1156 >seq6720 Length=2861 Score = 111 bits (122), Expect = 3e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||||||||| || || | ||| | ||| || | |||||| || || ||||| |||| Sbjct 936 AATATTATAATCAGAAAGCGTACGCCCATCTTCGAGTTGTTTGCCAGCGAAAATCAATCG 877 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 |||||| || ||||| |||||||| || ||||| || |||| ||| | ||| ||||| Sbjct 876 CTGTTGGTCCGGAGGAATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTATCGATAGT 817 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351 |||||| ||||| || || || || || ||||| || |||| || || || || Sbjct 816 ATCGGAGGACTCGACCTCAAGTGTGATTGTTTTGCCCGTTAAGGTCTTGACGAA 763 >seq3891 Length=3267 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 |||||||| ||||| | || | ||||| || || || || ||||| || | | Sbjct 1612 CGAAGTACGAGATGAAGGGTTGATTCTTTTTGGATGTTGTAATCAGATAAGGTGCGGCCA 1671 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||||| || |||||||| || | ||||| ||||| || || || |||||| Sbjct 1672 TCCTCAAGCTGTTTACCCGCAAAAATCAAACGTTGTTGGTCAGGGGGAATACCCTCTTTA 1731 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| ||||| | ||| | ||| ||||| || || || || || || || || ||| Sbjct 1732 TCTTGGATTTTTGATTTGACATTATCGATAGTGTCTGATGATTCCACCTCAAGTGTAATA 1791 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| || || || || || || |||||||| Sbjct 1792 GTCTTACCCGTGAGGGTCTTCACGAAAATTTGCAT 1826 >seq9398 Length=786 Score = 100 bits (110), Expect = 5e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 193214 TTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTAT 193273 |||||| || ||||| || ||||| ||||| || || || || ||||| |||||||| || Sbjct 8 TTGTTTACCAGCAAAGATCAATCTTTGTTGGTCCGGTGGGATGCCTTCCTTATCTTGGAT 67 Query 193274 TTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACC 193333 ||| |||||| || ||||| ||||||||||| || || || || || |||||||| Sbjct 68 CTTGCTTTTTACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGGGTAATGGTTTTACC 127 Query 193334 TGTTA 193338 |||| Sbjct 128 AGTTA 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899360415433440