Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000214055.1_202011-02-23] 26,142 sequences; 41,448,213 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq7170 127 3e-24 seq9397 113 7e-20 seq3891 98.7 1e-15 seq9398 87.8 3e-12 >seq7170 Length=2695 Score = 127 bits (140), Expect = 3e-24 Identities = 200/286 (70%), Gaps = 3/286 (1%) Strand=Plus/Minus Query 18422 TCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCT 18481 ||||| ||||| || ||||| |||| || || | ||||| || || ||||||| | Sbjct 1114 TCTTTGATATAGGTATCGATCAACAGGGAGTAAGTCTCAGAGTGAATATTTTCCATCATT 1055 Query 18482 ATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAAATCTTTCT 18541 ||||| || | |||||| ||| || || ||| || | |||||| || | ||| Sbjct 1054 ATCTGGAATCCATAAAAGAATCGTGCTTCAGGAATCTGTACTTCGCTACTGAAGCGTTCG 995 Query 18542 ACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATG 18601 || | |||||| || || || ||||| | | |||||||||||| | || | || Sbjct 994 ACAAGATTCTCGTTGACAATTCCGTCTGATGCTGCGAAAAATGCAAGTACGTGAGATATA 935 Query 18602 AAATGTTTTTCATTATCCTTGAG---ATTGTTCCATTCATCTATATCTTTTGATAGATCA 18658 |||| |||| ||| || || || ||||| || | || |||||| || |||||| Sbjct 934 AAATAACGCTCATCATCATTCAGTCTGTTATTCCAGTCGTGTAGATCTTTGGAAAGATCA 875 Query 18659 ACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTACATTT 18704 | |||||| | |||||||| |||| ||||||| |||||||||| Sbjct 874 ATTTCTTCTGCAGTCCAAAAGGATGCCTCGGCCTTCTTGTACATTT 829 >seq9397 Length=1229 Score = 113 bits (124), Expect = 7e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| | ||||| || || || || || || ||| |||| || ||| || Sbjct 1156 AATGCAAATTTTTGTCAAAACCTTAACCGGCAAGACAATAACACTAGAGGTAGAATCATC 1097 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | || ||||| || | |||||| || |||||||||||||| || || || || Sbjct 1096 CGACACAATAGACAACGTAAAGAGTAAAATCCAGGATAAAGAAGGCATCCCACCGGATCA 1037 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 |||||||||||| | ||| || |||||||| |||||| Sbjct 1036 ACAAAGATTGATATTTGCGGGAAAGCAGCTTGAAGAT 1000 >seq3891 Length=3267 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || | || || || ||||||||| | || || ||| || Sbjct 1826 ATGCAAATTTTCGTGAAGACCCTCACGGGTAAGACTATTACACTTGAGGTGGAATCATCA 1767 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| ||||| ||||||||||| || || || || || ||| Sbjct 1766 GACACTATCGATAATGTCAAATCAAAAATCCAAGATAAAGAGGGTATTCCCCCTGACCAA 1707 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | ||||||| ||| ||||| ||||| || ||| | | || ||||| ||||| || Sbjct 1706 CAACGTTTGATTTTTGCGGGTAAACAGCTTGAGGATGGCCGCACCTTATCTGATTACAAC 1647 Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026 || ||||| | || |||||| Sbjct 1646 ATCCAAAAAGAATCAACCCTTCAT 1623 >seq9398 Length=786 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 155847 ACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAAT 155906 ||||| ||||| ||||| | || ||||| ||| || | ||| ||||| |||| Sbjct 130 ACTGGTAAAACCATTACCCTTGAGGTCGAGTCTTCCGACACTATCGACAACGTAAAAAGC 71 Query 155907 AAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAG 155966 || || |||||||| |||||||| || || || |||||||||||||| | ||| ||||| Sbjct 70 AAGATCCAAGATAAGGAAGGCATCCCACCGGACCAACAAAGATTGATCTTTGCTGGTAAA 11 Query 155967 CAGCTCGA 155974 || || || Sbjct 10 CAACTTGA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731632842527200