Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000214055.1_202011-02-23] 26,142 sequences; 41,448,213 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq9398 118 2e-21 seq9397 118 2e-21 seq3891 116 7e-21 seq6720 111 3e-19 >seq9398 Length=786 Score = 118 bits (130), Expect = 2e-21 Identities = 101/125 (81%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 171923 TTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTAT 171982 ||||||||||||||| || ||||| |||||||| ||||| || ||||| |||||||| || Sbjct 8 TTGTTTACCAGCAAAGATCAATCTTTGTTGGTCCGGTGGGATGCCTTCCTTATCTTGGAT 67 Query 171983 TTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACC 172042 || ||||||| || ||||| || || || || || || || |||||||||||||| Sbjct 68 CTTGCTTTTTACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGGGTAATGGTTTTACC 127 Query 172043 AGTTA 172047 ||||| Sbjct 128 AGTTA 132 >seq9397 Length=1229 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 |||||||| || || | ||| ||||| | ||| | ||||| ||| || || || | Sbjct 929 CCACCTCTGAGACGAAGTACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCATTT 988 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | || || | || || || ||||| || ||||| ||||| || ||||| Sbjct 989 AGTGTGCGCCCATCTTCAAGCTGCTTTCCCGCAAATATCAATCTTTGTTGATCCGGTGGG 1048 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || ||||||||||| || |||||| | ||||| || ||| || || || |||||||| Sbjct 1049 ATGCCTTCTTTATCCTGGATTTTACTCTTTACGTTGTCTATTGTGTCGGATGATTCTACC 1108 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| || || || || || ||||| ||||| | || || |||||| Sbjct 1109 TCTAGTGTTATTGTCTTGCCGGTTAAGGTTTTGACAAAAATTTGCATT 1156 >seq3891 Length=3267 Score = 116 bits (128), Expect = 7e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| ||||| | || | || || | |||||||| |||||||| || | Sbjct 1645 ATGTTGTAATCAGATAAGGTGCGGCCATCCTCAAGCTGTTTACCCGCAAAAATCAAACGT 1704 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 ||||||||||| || || || ||||||||||| ||||| ||| |||||| ||||| Sbjct 1705 TGTTGGTCAGGGGGAATACCCTCTTTATCTTGGATTTTTGATTTGACATTATCGATAGTG 1764 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||||| ||||| || || || ||||| || ||||| || | || || | ||| || ||| Sbjct 1765 TCTGATGATTCCACCTCAAGTGTAATAGTCTTACCCGTGAGGGTCTTCACGAAAATTTGC 1824 Query 172068 AT 172069 || Sbjct 1825 AT 1826 >seq6720 Length=2861 Score = 111 bits (122), Expect = 3e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||||||||| || | | || | || || | |||||| ||||| ||||| |||| Sbjct 936 AATATTATAATCAGAAAGCGTACGCCCATCTTCGAGTTGTTTGCCAGCGAAAATCAATCG 877 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||||||||| || || |||||||| || ||||| || || ||| |||||| ||||| Sbjct 876 CTGTTGGTCCGGAGGAATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTATCGATAGT 817 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060 ||| || || || || || || || || ||||| || ||||| || || | ||| Sbjct 816 ATCGGAGGACTCGACCTCAAGTGTGATTGTTTTGCCCGTTAAGGTCTTGACGAA 763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904840224183600