Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000214055.1_202011-02-23] 26,142 sequences; 41,448,213 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq6804 208 2e-48 seq3373 96.9 8e-15 seq7712 93.3 1e-13 seq7754 86.0 1e-11 >seq6804 Length=2818 Score = 208 bits (230), Expect = 2e-48 Identities = 527/797 (66%), Gaps = 7/797 (1%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 |||||||| ||||| || || ||| | | ||| | ||||| |||||| |||| | Sbjct 2806 TATTTTGGCTTCAAGACGCTGGAAAGATCATATCTTCTTCGGCTCAATGATAAGATTGTG 2747 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 || || || ||||| ||| | | |||||||| | || ||||| | |||| ||| || Sbjct 2746 GAGCGGCCCCAACATATGATAATGCGTGTTGCTGTCGGGATTCACCAAGATGACATTGAA 2687 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 ||| ||| || ||| | | | || || | || ||||| | ||||| Sbjct 2686 TCTGCTATAGAGACATATAACTTGATGTCCAATAAATATTTTACGCATGCATCGCCTACA 2627 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 ||||| || ||||| | ||| | |||| || ||||| | | || || Sbjct 2626 TTATTTGCTGCTGGAACCCCACAATCACAGCTTTCTTCATGTTTTCTAATTGACATGAAG 2567 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTC--TTATTTCTAAAA 110601 || ||| |||||| || || || ||| || ||||| || ||| | | || || |||| Sbjct 2566 GAGGATAGTATTGATGGAATCTACGATACT-TTAAA-AACGTGCGCAATGATATCCAAAA 2509 Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661 | | || || |||||| | | | ||| ||| || | | ||| || ||||||| Sbjct 2508 ATGCCGGTGGTATTGGTCTAAATATACATCGTATCCGTGCGACAGGCGCCTATATCGCTG 2449 Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721 | |||| || || | |||| |||| |||||| | ||||||| ||| | || || | Sbjct 2448 GAACGAATGGAAACTCCAATGGAATTGTGCCAATGCTTCGAGTCTTTAACAATACCGCTA 2389 Query 110722 AATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778 ||| || | |||||||| |||| | || | || ||||| || | || || | Sbjct 2388 GATACGTTGACCAAGGTGGCAATAAGCGTCCAGGTGCCTTCGCTATATACTTAGAGCCAT 2329 Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838 ||||| |||| ||||||||||| | || || || || ||||| || |||||| Sbjct 2328 GGCATGCAGACATATTTGAATTTCTTGATCTCCGGAAGAATCATGGTAAAGAAGAAGTCC 2269 Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898 | || |||||| |||| ||||| | ||||| | ||| | || ||||| | ||| || Sbjct 2268 GCGCTCGTGATCTATTCTATGCCTTATGGATACCTGATCTTTTTATGAAGAGAGTTGAAA 2209 Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATG 110958 ||||||| ||| |||||||||| || | | ||||||| || ||||||| |||| Sbjct 2208 AAAATGGGGAATGGACTCTTATGTGCCCATGTGAATGTCCTGGTTTAGCTGATGTTTATG 2149 Query 110959 GAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAA 111018 | | || ||||| | | || || || |||||| ||||||| || ||||| | | Sbjct 2148 GTGATGAATTTGAGGCTTTATATGAGAAGTATGAACAAGAAGGTAAAGGTCGCAGAACCA 2089 Query 111019 TTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTT 111078 || || ||| | || |||| | || ||||| ||||| |||||| || ||||| | Sbjct 2088 TTATGGCACAAAAGCTATGGTACTCGATAGTTGAAGCACAAACTGAAACCGGTACTCCGT 2029 Query 111079 ATATTTTGTATAAAGAT 111095 ||| | || |||||| Sbjct 2028 TTATGCTTTACAAAGAT 2012 >seq3373 Length=2066 Score = 96.9 bits (106), Expect = 8e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 ||| | || |||||||| ||||| ||||||| | ||| ||| |||| | || || Sbjct 190 GTTTTATTTAATAGGCAGCCATCTTTGCATAAGCTTAGTATCATGAGTCATTATGTAAAG 131 Query 305390 GTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGAT 305449 || | | | || ||| | ||||||| ||| |||||| ||||| ||||| ||| Sbjct 130 GTTAGACCATGGCGAACTTTTAGGTTAAATGAGTGTGTTTGTACACCTTACAATGCAGAT 71 Query 305450 TTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 ||||||||||||||||||||| | || ||||||||| Sbjct 70 TTTGATGGAGATGAAATGAATCTACACGTACCTCAA 35 >seq7712 Length=2497 Score = 93.3 bits (102), Expect = 1e-13 Identities = 178/257 (69%), Gaps = 8/257 (3%) Strand=Plus/Plus Query 304889 CAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCTCAA 304948 ||||| ||| | || |||| ||||||||||| || ||||| |||||| ||| Sbjct 2180 CAATACCATGTAGCTACATATATGGATAATGATATCGCTGGTCAGCCTCAGGCACTCCAA 2239 Query 304949 AGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTATT 305008 | ||||| |||||| | ||| |||||| || |||| ||||| || |||||| || Sbjct 2240 AAGTCTGGTAGACCTGTTAAGTCTATTAGAGCCCGTCTTAAGGGTAAGGAAGGTCGTCTT 2299 Query 305009 CGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCTGAT 305068 |||||||| | ||||| || || ||||||||| ||| | | ||| || || |||| Sbjct 2300 CGAGGTAACTTGATGGGTAAGCGGGTTGATTTTTCGGCACGGACTGTCATAACGGGTGAT 2359 Query 305069 TCTCAAAT-TA-GTCTTCATGAATTAGGAGTTCCAATTGAA--ATTGCTTTAAAACTAAC 305124 ||||| || || | ||| | ||||| || | ||| |||||| | |||||| Sbjct 2360 --CCAAATCTATCACTCGACGAAGTTGGAGTACC--TAGAAGTATTGCTCGGACACTAAC 2415 Query 305125 ATTTCCAGAGAAAGTTA 305141 | ||| |||| |||| Sbjct 2416 TTATCCTGAGACTGTTA 2432 >seq7754 Length=2489 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/121 (76%), Gaps = 3/121 (2%) Strand=Plus/Plus Query 113783 TTTTTT---CGTAAAAATATCTGTCGCAACAAAATGACACTTTGCATGACCATGTTTTCC 113839 |||||| ||| || ||||| | |||||| |||| |||||||||||||| || || Sbjct 321 TTTTTTGCCCGTGAATATATCAATTCCAACAAGATGAACTTTTGCATGACCATGCTTGCC 380 Query 113840 AGTTTTTGATGTTGATATGGAATTTACTTTACACGGACGATTCTTAATTACAATATAACC 113899 |||||||||||| || || | ||| ||| || ||||||||||| || |||| | | || Sbjct 381 AGTTTTTGATGTAGACATCTCAGTTATTTTGCATGGACGATTCTTGATCACAACAAACCC 440 Query 113900 A 113900 | Sbjct 441 A 441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186415283728462