Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20pisi_20[genbank_20GCA_5F000214055.1_202011-02-23] 26,142 sequences; 41,448,213 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3891 114 1e-20 seq9397 102 7e-17 seq6720 84.2 2e-11 >seq3891 Length=3267 Score = 114 bits (126), Expect = 1e-20 Identities = 162/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || || || || || ||| ||||||| ||||| |||||| | || Sbjct 1827 CATGCAAATTTTCGTGAAGACCCTCACGGGTAAGACTATTACACTTGAGGTGGAATCATC 1768 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | |||||| |||||| ||||| ||||| || || || || || || Sbjct 1767 AGACACTATCGATAATGTCAAATCAAAAATCCAAGATAAAGAGGGTATTCCCCCTGACCA 1708 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| ||||| || | || || ||||| | || || | ||| | || |||||||| Sbjct 1707 ACAACGTTTGATTTTTGCGGGTAAACAGCTTGAGGATGGCCGCACCTTATCTGATTACAA 1648 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGT--TTTGCGTTTGCGGGG 27211 ||| ||||| || || ||| | ||| | || || || || | |||| Sbjct 1647 CATCCAAAAAGAATCAACCCTTCATCTCGTACTTCGCCTTCGTGGGG 1601 >seq9397 Length=1229 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| | ||||||||| | || || || || || ||| | ||| Sbjct 1155 ATGCAAATTTTTGTCAAAACCTTAACCGGCAAGACAATAACACTAGAGGTAGAATCATCC 1096 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||||| || || ||||||||||| ||||| |||||| Sbjct 1095 GACACAATAGACAACGTAAAGAGTAAAATCCAGGATAAAGAAGGCATCCCACCGGATCAA 1036 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || |||| || || || || | ||||| | || | || |||||| Sbjct 1035 CAAAGATTGATATTTGCGGGAAAGCAGCTTGAAGATGGGCGCACACTAAATGACTACAAC 976 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 |||||||| || || || | |||||||| | ||| | | ||||||| Sbjct 975 ATTCAAAAAGAATCAACTCTTCATTTGGTACTTCGTCTCAGAGGTGGCA 927 >seq6720 Length=2861 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 || ||||| | || || ||||| || || | ||||| | || || | || ||| Sbjct 778 ACGGGCAAAACAATCACACTTGAGGTCGAGTCCTCCGATACTATCGATAATGTGAAAGCC 837 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || ||||||||||| ||||| || || || || |||||||| || || | ||| |||||| Sbjct 838 AAGATTCAAGACAAGGAAGGAATTCCTCCGGACCAACAGCGATTGATTTTCGCTGGCAAA 897 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAA 27175 ||| | ||||| | || |||| ||||| || |||||||| Sbjct 898 CAACTCGAAGATGGGCGTACGCTTTCTGATTATAATATTCAAAA 941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434776279539840