Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1 136 8e-27 >seq1 Length=5717297 Score = 136 bits (150), Expect = 8e-27 Identities = 316/469 (67%), Gaps = 8/469 (2%) Strand=Plus/Minus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 |||||| |||||||||| |||| | || || ||||| | ||| ||| ||| Sbjct 4504078 TTTGCCCAGCGTCTCGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTTAGCGGTGCTTT- 4504020 Query 230233 TGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGA 230291 ||| |||| || ||||| ||| ||| | ||||| |||||| | || ||||| Sbjct 4504019 TGCATCCATTTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGA 4503960 Query 230292 GTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCT 230351 | ||||| ||| |||||||||||||| | || | | || || | || | || Sbjct 4503959 GCTCATCTCTCGTGACGAGGGTCTCCACACGGACTTTGCCTGTCTCTTGCACTCGCACCT 4503900 Query 230352 CCAGAACAA-GCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACG 230410 || ||| || | || ||| || || | ||||| || || || || | | || Sbjct 4503899 CCGCAACCGTGCCAGCAAG-GAGTCGATCCGAGCCATCATCACCGATGCCGTCGCCATCG 4503841 Query 230411 AAAAGGAGTTCATTTGT--GACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACT 230468 | ||||||| |||| || || | || ||| ||| | ||||||||| | || Sbjct 4503840 AGCAGGAGTT--TTTGACCGAGGCCCTGCCGTGTGCCCTGCTGGGCATGAACTCCACCCT 4503783 Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528 ||| ||||||||||| ||||| |||||||| | | | || || || ||||||| Sbjct 4503782 GATGAAGCAGTACATCGAGTTCGTCGCCGACCGTCTCCTCATCGCCCTCGGCAACGAGAA 4503723 Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588 | |||||| | | |||||||| | || |||||| ||| || || || ||||| Sbjct 4503722 GATCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGCGGCAAGAC 4503663 Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||| || ||||||||| |||||||||||| | | ||||| ||| Sbjct 4503662 CAACTTCTTTGAGAAGCGTGTCGGTGACTATCAGAAGGCCGGTGTCATG 4503614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823606952270