Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1 116 4e-21 >seq1 Length=5717297 Score = 116 bits (128), Expect = 4e-21 Identities = 354/542 (65%), Gaps = 15/542 (3%) Strand=Plus/Plus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | ||| || ||||| || || || | |||||||| || || ||| Sbjct 4503939 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCGCGCTTC 4503998 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || | || || | || |||||| ||||||||||||| ||||| Sbjct 4503999 TTGAGCCAGAAAATGGATGCAAAAGCACCGCTAAAGAAGATACCCTCGACGGCGGCAAAG 4504058 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164 || | | || | ||| | || | || |||| ||||||| | | |||| ||| Sbjct 4504059 GCAACGAGACGCTGGGCAAAGGTGGAGTTCTTGTCCGAAATCCATCGCAGGGCCCAATCG 4504118 Query 17165 GCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCT--CTTTTTCC 17221 || || |||| ||||| ||||| || | ||| || || | | | | | | Sbjct 4504119 GCCTTCTTGCGG-ATGCAGGGAATCGTGTCGACGGCGTTGAAGAGGTGCGTCCGCTGGGC 4504177 Query 17222 TGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCC 17281 || ||| | || || || || ||||| ||| ||| | |||||||| ||||||||| Sbjct 4504178 GGT--GTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAGGTCTCGGAGTGGATGTTCTCC 4504235 Query 17282 ATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAAT 17341 || ||||| || ||||| ||||| ||||| || | || || || || || |||| Sbjct 4504236 ATCATGATCTGGAAACCGTAGAAGCACCGGGCCTCAGGGATCTGGACCTCTCCGCTGAAT 4504295 Query 17342 CGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGC 17401 || || | || || ||||| || || || || ||||| || || || | || || Sbjct 4504296 CGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAGGCGGCAAAGAAGGCGAGGATGTGG 4504355 Query 17402 TTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG------CCAGTCCTTTAAATCTTTG 17455 ||||| |||||||||||| | || ||| |||||| | || ||| Sbjct 4504356 GAGATGAAGTATTTTTCGTCCTCGTTCAG---GCGGTTGTTCCAGTCGTGAGTGTCCTTG 4504412 Query 17456 GATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAA 17515 || | || | ||||||| |||||| || ||| | ||||| || ||||| | |||| Sbjct 4504413 GACAGGTCGATCTCTTCGGCGGTCCAGAATGAGGCCTCGGCCTTCTTGTACATTTGCCAA 4504472 Query 17516 AT 17517 || Sbjct 4504473 AT 4504474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545412389720