Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02]
29 sequences; 27,200,907 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 4e-21
>seq1
Length=5717297
Score = 116 bits (128), Expect = 4e-21
Identities = 354/542 (65%), Gaps = 15/542 (3%)
Strand=Plus/Plus
Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044
|||||||| | ||| || ||||| || || || | |||||||| || || |||
Sbjct 4503939 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCGCGCTTC 4503998
Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104
|| | ||| || || | || || | || |||||| ||||||||||||| |||||
Sbjct 4503999 TTGAGCCAGAAAATGGATGCAAAAGCACCGCTAAAGAAGATACCCTCGACGGCGGCAAAG 4504058
Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164
|| | | || | ||| | || | || |||| ||||||| | | |||| |||
Sbjct 4504059 GCAACGAGACGCTGGGCAAAGGTGGAGTTCTTGTCCGAAATCCATCGCAGGGCCCAATCG 4504118
Query 17165 GCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCT--CTTTTTCC 17221
|| || |||| ||||| ||||| || | ||| || || | | | | | |
Sbjct 4504119 GCCTTCTTGCGG-ATGCAGGGAATCGTGTCGACGGCGTTGAAGAGGTGCGTCCGCTGGGC 4504177
Query 17222 TGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCC 17281
|| ||| | || || || || ||||| ||| ||| | |||||||| |||||||||
Sbjct 4504178 GGT--GTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAGGTCTCGGAGTGGATGTTCTCC 4504235
Query 17282 ATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAAT 17341
|| ||||| || ||||| ||||| ||||| || | || || || || || ||||
Sbjct 4504236 ATCATGATCTGGAAACCGTAGAAGCACCGGGCCTCAGGGATCTGGACCTCTCCGCTGAAT 4504295
Query 17342 CGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGC 17401
|| || | || || ||||| || || || || ||||| || || || | || ||
Sbjct 4504296 CGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAGGCGGCAAAGAAGGCGAGGATGTGG 4504355
Query 17402 TTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG------CCAGTCCTTTAAATCTTTG 17455
||||| |||||||||||| | || ||| |||||| | || |||
Sbjct 4504356 GAGATGAAGTATTTTTCGTCCTCGTTCAG---GCGGTTGTTCCAGTCGTGAGTGTCCTTG 4504412
Query 17456 GATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAA 17515
|| | || | ||||||| |||||| || ||| | ||||| || ||||| | ||||
Sbjct 4504413 GACAGGTCGATCTCTTCGGCGGTCCAGAATGAGGCCTCGGCCTTCTTGTACATTTGCCAA 4504472
Query 17516 AT 17517
||
Sbjct 4504473 AT 4504474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545412389720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |