Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1 105 8e-18 >seq1 Length=5717297 Score = 105 bits (116), Expect = 8e-18 Identities = 352/544 (65%), Gaps = 8/544 (1%) Strand=Plus/Plus Query 24149 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 24208 ||| ||||||||||| | | || | |||||||| || ||||| |||||||| || || Sbjct 4503932 GTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACC 4503991 Query 24209 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 24268 ||||| || ||||| || ||||| ||||| | || |||||| || || || || || Sbjct 4503992 GCGCTTCTTGAGCCAGAAAATGGATGCAAAAGCACCGCTAAAGAAGATACCCTCGACGGC 4504051 Query 24269 CGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG---CTGTCATGTATCCACTTTTGAGC 24325 |||||||||| || | | || | || | |||| ||||| | || Sbjct 4504052 GGCAAAGGCAACGAGACGCTGGGCAAAGGTGGAGTTCTTGTCCGAAATCCATCGCAGGGC 4504111 Query 24326 CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttt 24385 ||||||||||||||| | || || || || || | || || ||||| | | Sbjct 4504112 CCAATCGGCCTTCTTGCGGATGCAGGGAATCGTGTCGACGGCGTTGAAGAGGTGCGTCCG 4504171 Query 24386 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 24445 | | || || | || || ||||| | || || | || || || ||||| Sbjct 4504172 CTGGGCGGTGTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAGGTCTCGGAGTGGATGTT 4504231 Query 24446 TTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACA 24505 || || || || || |||||||| || | ||||| | ||||| || ||| | Sbjct 4504232 CTCCATCATGATCTGGAAACCGTAGAAGCACCGGGCCTCAGGGATCTGGACCTCTCCGCT 4504291 Query 24506 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 24565 ||||| || | | || || || || ||||| ||| ||| ||||| || || | | Sbjct 4504292 GAATCGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAGGCGGCAAAGAAGGCGAGGAT 4504351 Query 24566 ATGTTTTATAAAATATTTTTCGT-CTGGTGTTA---GTTTATTCCAATCATTGATATCTT 24621 || || || |||||||||| || || | | | || ||||| || | | || | Sbjct 4504352 GTGGGAGATGAAGTATTTTTCGTCCTCGT-TCAGGCGGTTGTTCCAGTCGTGAGTGTCCT 4504410 Query 24622 TAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCC 24681 | || | || | ||||| | ||||| ||||| ||||| ||||| || ||||| | || Sbjct 4504411 TGGACAGGTCGATCTCTTCGGCGGTCCAGAATGAGGCCTCGGCCTTCTTGTACATTTGCC 4504470 Query 24682 AGAT 24685 | || Sbjct 4504471 AAAT 4504474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721384775920