Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 145 2e-29 seq8 95.1 2e-14 >seq1 Length=5717297 Score = 145 bits (160), Expect = 2e-29 Identities = 309/458 (67%), Gaps = 9/458 (2%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||||||||| || || || || ||||||||||| ||||| || ||||||||||||||| Sbjct 4504063 GTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTTAGCGGTGCTTTTGCATCCATTTTCTGG 4504004 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | ||| | |||| || ||||||| |||||| ||| |||| ||| | ||| Sbjct 4504003 CTCAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGAC 4503944 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACC--- 102094 || ||||| || |||||||| || || ||| | | | | ||| Sbjct 4503943 GAGGGTCTCCACACGGACTTTGCCTG---TCTCTTGCACTCGCACCT--CCGCAACCGTG 4503889 Query 102095 CCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154 ||| |||| || ||| | | || |||| || |||||| || || || || ||| Sbjct 4503888 CCAGCAAG-GAGTCGATCCGAGCCATCATCACCGATGCCGTCGCCATCGAGCAGGAGTTT 4503830 Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214 | || | ||||||| | | |||| ||||||| || |||||| |||||| Sbjct 4503829 TTGACCGAGGCCCTGCCGTGTGCCCTGCTGGGCATGAACTCCACCCTGATGAAGCAGTAC 4503770 Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTT 102274 || || || || || || || | | | | || || ||| ||| || | Sbjct 4503769 ATCGAGTTCGTCGCCGACCGTCTCCTCATCGCCCTCGGCAACGAGAAGATCTACAACGCC 4503710 Query 102275 ACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAA 102334 |||||||||||| |||||||| || || ||||||| ||||||||||| ||||| Sbjct 4503709 ACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGCGGCAAGACCAACTTCTTTGAG 4503650 Query 102335 AAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGC 102372 ||| | |||| || ||||| ||| |||||||| Sbjct 4503649 AAGCGTGTCGGTGACTATCAGAAGGCCGGTGTCATGGC 4503612 >seq8 Length=1130364 Score = 95.1 bits (104), Expect = 2e-14 Identities = 175/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || ||||| |||||||||| || || | ||| || || || || || ||| Sbjct 757396 CCGATGCCACCAGCCATCTTGGAGATCATGGCGCACGTCTTGAGGGTGTCGTAGATGCCC 757337 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905 || ||||| || || | | | | | | |||||||||||| || |||| | ||| Sbjct 757336 TCGATGCTGTCGTCCTTCATGTCGACCAAGAAGCACGAGGACAGCTGGGCCTGGGGGGTT 757277 Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965 || || || || ||||| || || || || || | | || |||||||||| ||| Sbjct 757276 CCGGCGTTGAAGAGGGTGGGAGACGCGTGCGTGAAGAACTTGCTGGACATGAGATTGTAT 757217 Query 94966 GTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATG 95025 || || | ||| | |||||| ||| |||||||| || || | ||| |||||| Sbjct 757216 GTCTCGAGGACTCGCTCGATGTCGTCTCCCCAGATGCCGACGGCGACTCTCATGATCATG 757157 Query 95026 TCCTGAGGGCGCTCAAC 95042 | |||||| ||||| || Sbjct 757156 TGCTGAGGACGCTCGAC 757140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583632307695