Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1 123 3e-23 >seq1 Length=5717297 Score = 123 bits (136), Expect = 3e-23 Identities = 356/544 (65%), Gaps = 8/544 (1%) Strand=Plus/Plus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||| ||||||||||| | | || | ||||| || || ||||| |||||||| || || Sbjct 4503932 GTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACC 4503991 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||||| || ||||| || ||||| || || | ||| ||||||||| || || || || Sbjct 4503992 GCGCTTCTTGAGCCAGAAAATGGATGCAAAAGCACCGCTAAAGAAGATACCCTCGACGGC 4504051 Query 33716 AGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCACTTTTGAGC 33772 |||||||||| || | || || | || | |||| ||||| | || Sbjct 4504052 GGCAAAGGCAACGAGACGCTGGGCAAAGGTGGAGTTCTTGTCCGAAATCCATCGCAGGGC 4504111 Query 33773 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 33832 ||||||||||||||| | || || ||||| || | ||| || ||||| | | Sbjct 4504112 CCAATCGGCCTTCTTGCGGATGCAGGGAATCGTGTCGACGGCGTTGAAGAGGTGCGTCCG 4504171 Query 33833 ttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 33892 | | || || | || || || || | || || | || || || ||||| Sbjct 4504172 CTGGGCGGTGTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAGGTCTCGGAGTGGATGTT 4504231 Query 33893 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACA 33952 || || ||||| || |||||||| || | ||||| | ||||| || ||| | Sbjct 4504232 CTCCATCATGATCTGGAAACCGTAGAAGCACCGGGCCTCAGGGATCTGGACCTCTCCGCT 4504291 Query 33953 AAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATAC 34012 ||||| || | | || || || || ||||||||| ||| ||||| || || | | Sbjct 4504292 GAATCGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAGGCGGCAAAGAAGGCGAGGAT 4504351 Query 34013 ATGTTTTATAAAATATTTTTCGT-CTGGTGTTA---GTTTATTCCAATCATTGATATCTT 34068 || || || |||||||||| || || | | | || ||||| || | | || | Sbjct 4504352 GTGGGAGATGAAGTATTTTTCGTCCTCGT-TCAGGCGGTTGTTCCAGTCGTGAGTGTCCT 4504410 Query 34069 TAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCC 34128 | || | || | ||||| | ||||| ||||| ||||| ||||| || ||||| | || Sbjct 4504411 TGGACAGGTCGATCTCTTCGGCGGTCCAGAATGAGGCCTCGGCCTTCTTGTACATTTGCC 4504470 Query 34129 AGAT 34132 | || Sbjct 4504471 AAAT 4504474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817371691120