Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1 104 3e-17 >seq1 Length=5717297 Score = 104 bits (114), Expect = 3e-17 Identities = 354/546 (65%), Gaps = 12/546 (2%) Strand=Plus/Plus Query 36172 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 36231 ||| ||||||||||| | | || | |||||||| || ||||| |||||||| || || Sbjct 4503932 GTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACC 4503991 Query 36232 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 36291 ||||| || ||||| || ||||| ||||| | || |||||| || || || || || Sbjct 4503992 GCGCTTCTTGAGCCAGAAAATGGATGCAAAAGCACCGCTAAAGAAGATACCCTCGACGGC 4504051 Query 36292 CGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT-----ATCCACTTTTGA 36346 |||||||||| || | || || || | | | || ||| ||||| | Sbjct 4504052 GGCAAAGGCAACGAGACGCTGGGCA-AAGGTGGAGT-TCTTGTCCGAAATCCATCGCAGG 4504109 Query 36347 GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttt 36406 ||||||||||||||||| | || || || || || | || || ||||| | | Sbjct 4504110 GCCCAATCGGCCTTCTTGCGGATGCAGGGAATCGTGTCGACGGCGTTGAAGAGGTGCGTC 4504169 Query 36407 ttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATG 36466 | | || || | || || ||||| | || || | || || || ||| Sbjct 4504170 CGCTGGGCGGTGTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAGGTCTCGGAGTGGATG 4504229 Query 36467 TTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTA 36526 || || || || || || |||||||| || | ||||| | ||||| || ||| Sbjct 4504230 TTCTCCATCATGATCTGGAAACCGTAGAAGCACCGGGCCTCAGGGATCTGGACCTCTCCG 4504289 Query 36527 CAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 36586 | ||||| || | | || || || || ||||| ||| ||| ||||| || || | Sbjct 4504290 CTGAATCGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAGGCGGCAAAGAAGGCGAGG 4504349 Query 36587 ACATGTTTTATAAAATATTTTTCGT-TTGGTGTTA---GTTTATTCCAATCATTGATATC 36642 | || || || |||||||||| | || | | | || ||||| || | | || Sbjct 4504350 ATGTGGGAGATGAAGTATTTTTCGTCCTCGT-TCAGGCGGTTGTTCCAGTCGTGAGTGTC 4504408 Query 36643 TTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 36702 || || | || | ||||| | ||||| ||||| ||||| ||||| || ||||| | Sbjct 4504409 CTTGGACAGGTCGATCTCTTCGGCGGTCCAGAATGAGGCCTCGGCCTTCTTGTACATTTG 4504468 Query 36703 CCAGAT 36708 ||| || Sbjct 4504469 CCAAAT 4504474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172561412360