Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq4 118 9e-22 seq1 91.5 1e-13 >seq4 Length=2575654 Score = 118 bits (130), Expect = 9e-22 Identities = 134/177 (76%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 20930 ATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGT 20989 ||| ||||| | ||||| ||||| || || |||| | |||| || | |||||||| Sbjct 1168237 ATCGACGTGATCTTTGTATACGTGTGCATCGCCCATGACGTGCGTAAGG-CTCCCGGGCA 1168179 Query 20990 C-AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 | | | | ||||||||||| || | ||||||||| ||||||||||||||||| || | Sbjct 1168178 CCAAGTCGCAGACGTGAGCGAGCATGTGCGTCAGGAGCGCGTAGCTGGCGATGTTGAAGG 1168119 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCC 21105 | ||||| |||||||||||| || | |||||||||||| ||| || | ||||| Sbjct 1168118 GCACCCCAAGGCCCATGTCGCACGATCGCTGGTACAGCTGACAGTGGAGATGCCCCC 1168062 >seq1 Length=5717297 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 15824 AGGGCGCGACGGTGATCAACCCCATTCCGGGGTTTTACGACGAGCCGGTCCTGGTGGTCG 15883 ||||||||||||| ||| | ||| ||||| ||||||| ||| || | | ||| Sbjct 1883571 AGGGCGCGACGGTCATCGAGCCCGAGAGGGGGTACTACGACGTCCCGATCGCGACGCTCG 1883512 Query 15884 ATTTTGCCAGCCTGTACCCGAGCATCATCCAGGCGCACAACCTGTGCTAC 15933 | || || ||||||||||||||||||||||||||||||||||||||| Sbjct 1883511 ACTTCGCGTCGCTGTACCCGAGCATCATCCAGGCGCACAACCTGTGCTAC 1883462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775848807920