Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 132 7e-26 >seq1 Length=5717297 Score = 132 bits (146), Expect = 7e-26 Identities = 357/543 (66%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033 ||| ||||||||||| | | || || |||||||| || ||||| |||||||| || || Sbjct 4503932 GTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACC 4503991 Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093 ||||| || ||||| || ||||| ||||| | || ||||||||| || || || || Sbjct 4503992 GCGCTTCTTGAGCCAGAAAATGGATGCAAAAGCACCGCTAAAGAAGATACCCTCGACGGC 4504051 Query 50094 GGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTCATGTATCCACTTTTGAGC 50150 |||||||||||| || | || || | ||| | |||| ||||| | || Sbjct 4504052 GGCAAAGGCAACGAGACGCTGGGCAAAGGTGGAGTTCTTGTCCGAAATCCATCGCAGGGC 4504111 Query 50151 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 50210 ||||||||||||||| | || || ||||| || | ||| || ||||| | | Sbjct 4504112 CCAATCGGCCTTCTTGCGGATGCAGGGAATCGTGTCGACGGCGTTGAAGAGGTGCGTCCG 4504171 Query 50211 ttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 50270 | | || || | || || || || | || || | || || || ||||| Sbjct 4504172 CTGGGCGGTGTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAGGTCTCGGAGTGGATGTT 4504231 Query 50271 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACA 50330 || || ||||| || |||||||| || | ||||| | ||||| || ||| | Sbjct 4504232 CTCCATCATGATCTGGAAACCGTAGAAGCACCGGGCCTCAGGGATCTGGACCTCTCCGCT 4504291 Query 50331 AAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 50390 ||||| ||| | | || || || || ||||| ||| ||| ||||| || || | | Sbjct 4504292 GAATCGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAGGCGGCAAAGAAGGCGAGGAT 4504351 Query 50391 ATGTTTTATAAAATGTTTTTCGT--TGGGT-GTTAGTTTATTCCAATCATTGATATCTTT 50447 || || || | |||||||| | | | | || ||||| || | | || || Sbjct 4504352 GTGGGAGATGAAGTATTTTTCGTCCTCGTTCAGGCGGTTGTTCCAGTCGTGAGTGTCCTT 4504411 Query 50448 AGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 50507 || | || | ||||| | ||||| ||||| ||||| ||||| || ||||| | ||| Sbjct 4504412 GGACAGGTCGATCTCTTCGGCGGTCCAGAATGAGGCCTCGGCCTTCTTGTACATTTGCCA 4504471 Query 50508 GAT 50510 || Sbjct 4504472 AAT 4504474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268539627560