Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 307 2e-78 seq8 167 3e-36 >seq1 Length=5717297 Score = 307 bits (340), Expect = 2e-78 Identities = 582/845 (69%), Gaps = 25/845 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| |||||||||| ||||| ||||||| || ||||| | ||||||| |||| ||| Sbjct 4504474 ATTTGGCAAATGTACAAGAAGGCCGAGGCCTCATTCTGGACCGCCGAAGAGATCGACCTG 4504415 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||| |||| ||| | | || ||| || || | | || || || Sbjct 4504414 TCCAAGGACACTCACGACTGGAACAACCGCCTGAACGAGGACGAAAAATACTTCATCTCC 4504355 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197 ||||| | ||||||||||||| ||| |||||||| |||||||| || ||| |||| || Sbjct 4504354 CACATCCTCGCCTTCTTTGCCGCCTCTGATGGAATTGTCAACGAGAACCTGGTTGAG-CG 4504296 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 |||| |||| | || || |||| |||||| ||||| ||||| |||||||| Sbjct 4504295 ATTCAGCGGAGAGGTCCAGATCCCTGAGGCCCGGTGCTTCTACGGTTTCCAGATCATGAT 4504236 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGAT-CCGC 125316 |||||| | ||||| || | ||||| || ||||||| ||||| || |||| Sbjct 4504235 GGAGAACATCCACTCCGAGACCTACTCCCTCCTCATTGACACCTACATCAAGGACACCGC 4504176 Query 125317 --AACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374 | || | ||| ||||| ||||| |||||||| | || | || || || ||||| Sbjct 4504175 CCAGCGGACGCAC---CTCTTCAACGCCGTCGACACGATTCCCTGCATCCGCAAGAAGGC 4504119 Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434 | |||| | || ||||| ||| | || || | | ||| | | || || || Sbjct 4504118 CGATTGGGCCCTGCGATGGATTTCGGACAAGAACTCCACCTTTGCCCAGCGTCTCGTTGC 4504059 Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494 || |||||||| ||||| ||||||||| ||| |||||| |||| || |||||||| Sbjct 4504058 CTTTGCCGCCGTCGAGGGTATCTTCTTTAGCGGTGCTTTTGCATCCATTTTCTGGCTCAA 4503999 Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554 ||||||||| ||||||||||| || || | |||||| | || ||||| |||||||| Sbjct 4503998 GAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGG 4503939 Query 125555 CCTACACTGTGACTTTGCCATTCTACTG-TTTCGCAACTATCTGCGTCCCGAGTGCAGAT 125613 || ||| ||||||||| ||| || ||||| | || || || ||| Sbjct 4503938 TCTCCACACGGACTTTGCCTGTCTCTTGCACTCGCACC--TCCGCAACC---GTG----- 4503889 Query 125614 CCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673 ||||| | || | || ||| | ||||||||||| || || || |||||| Sbjct 4503888 CCAGCAAGGAGTCGATCCGAGCCATCATCACCGATGCCGTCGCCATCGAGCAGGAGTTTT 4503829 Query 125674 TAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACA 125733 | ||||| |||| ||| | || | |||||||||| || || ||| |||||| Sbjct 4503828 TGACCGAGGCCCTGCCGTGTGCCCTGCTGGGCATGAACTCCACCCTGATGAAGCAGTACA 4503769 Query 125734 TAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACAACG 125790 | ||||| || || || ||||| || || | ||| || ||||| ||||||| Sbjct 4503768 TCGAGTTCGTCGCCGACCGTCTCCTCATCG---CCCTCGGCAACGAGAAGATCTACAACG 4503712 Query 125791 CCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCG 125850 ||| || ||||| || |||||| | ||| || || | || ||||||||||| || | Sbjct 4503711 CCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGCGGCAAGACCAACTTCTTTG 4503652 Query 125851 AGAAG 125855 ||||| Sbjct 4503651 AGAAG 4503647 >seq8 Length=1130364 Score = 167 bits (184), Expect = 3e-36 Identities = 337/495 (68%), Gaps = 4/495 (1%) Strand=Plus/Plus Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 ||||||| ||||||||||| || || || ||||| | || ||||| | || || | Sbjct 757501 GATACGTCGACCAGGGCGGCAACAAGCGCCCCGGCGCCTTCGCAATCTACCTTGAGCCCT 757560 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||||| ||||| || || || |||| ||||||| ||| |||| || |||| | Sbjct 757561 GGCACGCCGACGTCTTCGAGTTCCTCGACTTGCGCAAGAACCATGGCAAGGAGGAGGTCC 757620 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 | ||| ||||| |||| || |||||| | || ||| | ||||||||||| ||| | Sbjct 757621 GTGCCCGGGACCTGTTCCTGGCCCTCTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGA 757680 Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104 | | |||||| || ||||||||| || | ||||| || |||| |||| | Sbjct 757681 AGAACCTCGACTGGACGCTCATGTGCCCCAACGAATGCCCCGGCCTCGCCGACTGCTACG 757740 Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGA 97163 || ||||||| |||||| |||| ||||| | |||||||| || |||| | Sbjct 757741 GCCAAGAGTTCGAGGCCCTGTACGAAAAGTACGAAAAGGAGGGCCGTGGCCGCAAGACCA 757800 Query 97164 GTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222 ||| ||| | |||| |||||| | ||||| | ||| ||| ||||| || | || Sbjct 757801 TTCG-TGCGC-AGAAGCTGTGGTACTCCATCCTCGAGGCCCAGACGGAGACCGGCAACCC 757858 Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282 | ||| || |||||||| || || | || |||||||| || | || || || Sbjct 757859 CTTCATGCTGTACAAGGACGCCTGCAACAGGAAGAGCAACCAGAAGAACCTAGGAACGAT 757918 Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGT 97342 | ||||||| || ||||| || || | |||||| || | || |||||| ||| || Sbjct 757919 CCGCAGCTCCAACCTCTGCACCGAGATCATCGAGTACTCCGCCCCCGACGAGGTGGCCGT 757978 Query 97343 TTGCGTTCTGGCATC 97357 ||| ||||| || Sbjct 757979 CTGCAACCTGGCGTC 757993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058931366040