Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 1e-12 seq2 86.0 4e-12 >seq4 Length=2575654 Score = 87.8 bits (96), Expect = 1e-12 Identities = 142/198 (72%), Gaps = 5/198 (3%) Strand=Plus/Minus Query 25397 TCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGC 25456 ||||||||| | || ||||| | ||| || || |||||||| ||| ||||| || Sbjct 1168270 TCTGGGCTCGCGGTCCAGCTGCTCCCTCAACGCATCGACGTGATCTTTGTATACGTGTGC 1168211 Query 25457 GTCTCCCA-GA-GTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATG 25514 || |||| || ||| | | | ||| || || | | || |||| ||| | |||| Sbjct 1168210 ATCGCCCATGACGTGCGTA-AGGCTC-CCGGGCACCAAGTCGCAGACGTGAGCGAGCATG 1168153 Query 25515 TACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGA 25574 | ||| ||||| ||||||||||||||| ||||| ||||| | ||||||| | | ||| Sbjct 1168152 TGCGTCAGGAGCGCGTAGCTGGCGATGTTGAAGGGCACCCCAAGGCCCATGT-CGCACGA 1168094 Query 25575 CCTCTGGTAGAGCTGACA 25592 | |||||| |||||||| Sbjct 1168093 TCGCTGGTACAGCTGACA 1168076 >seq2 Length=3830584 Score = 86.0 bits (94), Expect = 4e-12 Identities = 115/152 (76%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 44399 CCAGAGATGGGCGACAAGTTTGCGTCGTTC-ACGGCGCAAAAGGG-GACATGCGGAGCCG 44456 || ||| ||||||||||||| |||| | ||||| |||||||| | | | ||| | Sbjct 2012216 CCTGAGCTGGGCGACAAGTTCTCGTCCCGCCACGGC-CAAAAGGGCGTCGT-CGGCATCA 2012273 Query 44457 TCCTGACCCAGGAGGACATGCCCTTCGACAAAAACGGGGTGGTGCCC-GACCTCATCATC 44515 || || |||||||||||||||||||| | |||||| | |||||| ||| ||||||| Sbjct 2012274 TCGTGGACCAGGAGGACATGCCCTTCGCGGACAACGGGCT-GTGCCCGGACATCATCATG 2012332 Query 44516 AACCCCCACGCCTTTCCCTCCAGGATGACCGT 44547 ||||| |||| || || ||| | ||||| || Sbjct 2012333 AACCCTCACGGTTTCCCGTCCCGAATGACAGT 2012364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137479782617