Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq9 98.7 9e-16 >seq9 Length=1038790 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||| |||||| || |||||||| || | ||| || ||| | || || || Sbjct 527365 CGCAGGACCAGGTGCAATGTCGATTCCTTCTGAATGTTGTAGTCGG--AGAGGGTCCGAC 527308 Query 94853 --TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 || |||| ||| || || | || || |||| |||||||| || |||||||| || | Sbjct 527307 CGTCTTCCAACTGCTTGCCCGCGAAAATCAATCGCTGCTGATCAGGGGGAATACCCTCCT 527248 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | ||| || | ||||||| | ||| ||||| | || || || | ||||| Sbjct 527247 TGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCCGATGACTCAACCTCGAGCGTGA 527188 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || || | || || || ||||||||||| Sbjct 527187 TGGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 527151 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || ||||| || | ||| ||||| || |||| | |||||| || || || || Sbjct 526788 GTGGACTCCTTCTGGATGTTGTAATCCGACAAAGTGCGGCCATCCTCGAGTTGCTTGCCA 526729 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| | | |||||| || ||||| || || || ||||| | || || | ||| Sbjct 526728 GCAAAGATGAGGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTC 526669 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | | ||||| | || || || | |||||||| ||||| || ||||| Sbjct 526668 ACATTGTCAATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTTCCGGTCAGAGTC 526609 Query 94991 TTCACAAAGATCTGCATG 95008 || || |||||||||||| Sbjct 526608 TTGACGAAGATCTGCATG 526591 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 94817 TCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAG 94876 ||||| || | ||| || ||||||| ||| || || ||||| || || | ||| Sbjct 527569 TCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCGTCTTCGAGCTGCTTACCAGCGAAG 527510 Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936 || | | |||||||| |||||||| ||||| ||||| | ||| || | || ||| | Sbjct 527509 ATAAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGAATCTTCGATTTAACGTTG 527450 Query 94937 CCGACAGTGTCAGCGTGGT-CGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCAC 94995 ||| ||||| || || | |||| || | || |||||||| || || | || || || Sbjct 527449 TCGATGGTGTC-GCTTGATTCGACCTCGAGGGTAATGGTTTTACCCGTCAAGGTCTTGAC 527391 Query 94996 AAAGATCTGCAT 95007 ||||||||||| Sbjct 527390 GAAGATCTGCAT 527379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291037494440