Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq9 96.9 3e-15 seq3 89.7 5e-13 >seq9 Length=1038790 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || || || ||| | || ||| |||| | ||||||| | Sbjct 527379 ATGCAGATCTTCGTCAAGACCTTGACGGGTAAAACCATTACCCTCGAGGTCGAATCAAGC 527438 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| |||||| ||||| ||||| || ||||| ||||| Sbjct 527439 GACACCATCGACAACGTTAAATCGAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAG 527498 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || || | || || || || |||||||| | | | | | | |||||||| ||| Sbjct 527499 CAGCGCCTTATCTTCGCTGGTAAGCAGCTCGAAGACGGTCGCACCTTGAGCGACTACAAC 527558 Query 26949 ATTCAAAAAGA 26959 || || || || Sbjct 527559 ATCCAGAAGGA 527569 Score = 82.4 bits (90), Expect = 7e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 || || ||| | |||||| |||| | || || |||||||||||| | ||||| Sbjct 526947 ACGGGTAAAACAATCACCCTCGAGGTCGAGTCCTCCGACACCATCGACAATGTCAAGTCG 527006 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 ||||| ||||| || || || |||||||| || || | || || | || ||| || Sbjct 527007 AAGATCCAAGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGAAAG 527066 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 || ||||| || | ||| | || |||||| ||||| || || || || || ||||| Sbjct 527067 CAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAT 527126 Query 26973 CTGGTCCT 26980 || ||||| Sbjct 527127 CTCGTCCT 527134 >seq3 Length=3706406 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || || || | || || || |||||||| | || | || || Sbjct 1555018 CAAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTC 1555077 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 |||||||||||| | ||||| ||||| ||||| || || || || ||||| Sbjct 1555078 TTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 1555137 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || | ||||| | || |||||| || ||||| |||| | | | || |||||| Sbjct 1555138 CCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTA 1555197 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986 ||||| || || || || || |||| || |||||||| || Sbjct 1555198 CAACATCCAGAAGGAGTCCACCCTCCACCTCGTCCTGAGGCT 1555239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662226484880