Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq8 289 3e-73 seq1 156 4e-33 seq9 143 3e-29 seq3 116 3e-21 seq7 104 2e-17 >seq8 Length=1130364 Score = 289 bits (320), Expect = 3e-73 Identities = 939/1440 (65%), Gaps = 35/1440 (2%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| || || ||||||| || || ||| || | ||| |||||| | || Sbjct 758566 TTGACGACCTGGAATTCACCGGCCAGGACTCGTCGCTGGTAGATGTTGGACGTGTAAGGC 758507 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || | ||||| ||||| ||||| || | ||| | ||||| |||||| ||| ||| Sbjct 758506 TCGAAGCATTCGTTGTTGCCGAGGATCTGCGAGGTGCTGGCGGTCGGCATGGGCGCGACC 758447 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | || ||||| |||||||||| |||||| | ||||| | | |||| ||||| Sbjct 758446 AGCAAGCTGTTGCGGAGGCCGTGCTCCTTGATCTGCTCCTTCAAGGAGTCCCACTCCCAC 758387 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGC-GGGGCT 145296 || | |||| | |||||||||||||||||||| | ||||||||| ||| || | | Sbjct 758386 AGGTCGGACGGCTTGACGTCCCACATGTCGTACTGAAGAATGCCCTCCGAGGCAGGAGAT 758327 Query 145297 GCCTTGAA--AGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGA 145354 ||||||| | ||| || ||| ||||||| ||| ||||| ||| Sbjct 758326 CCCTTGAACGATGAA---TAGGGGCCTTCGACCTTGGCGATCTCCATGGAGGCCTCGAGA 758270 Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414 | || || || |||||| || | | |||| ||| || || | |||| Sbjct 758269 GATGCGTGGTAGATGGTCTCGAAGATCTTCTTGTTCAGCTCGCGAGCCTCGGGGGACTCG 758210 Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474 | ||||| ||||| | || || |||||||| ||||| | || ||||||||||| Sbjct 758209 AAAGGCATTCGCAGGGCAAGGAAGGCGTCGGCGAGACCCTGCACACCGACGCCGATGGGG 758150 Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATT 145534 || || ||||||||| ||| ||| || || || || | || |||||| ||| Sbjct 758149 CGGTGGCGCATGTTGCTGTTCCAGGCCTCCTGGACCGGGTAGTGGTTCACGTCGATGATT 758090 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 | || | ||| || || || ||||| || | | | | ||| | |||||| | | Sbjct 758089 CTGTTGAGGTTGCGAACGACGACCTTGGTGACCTCGTGGAGCTTCTGGAAGTCATAGCAG 758030 Query 145595 GCCTC------GTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACT 145648 |||| ||| |||| | | || | ||| | ||||||| || || || Sbjct 758029 CCCTCATTGTAGTCGACGAATGC-CGGC-----AGGGCCAGGGACGCCAGGTTGCAGACG 757976 Query 145649 GCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATG 145708 ||| ||| |||| | || ||| | | |||||||| ||| | ||| | ||| Sbjct 757975 GCCACCTCGTCGGGGGCGGAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATC 757916 Query 145709 GTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGT 145768 ||||| || || | ||| || || ||||||||||| ||||||||||| |||||| | || Sbjct 757915 GTTCCTAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTACAGCATGAAGGGG 757856 Query 145769 CCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGC 145828 ||| |||||| ||| | ||| | ||| | || | ||||||||| | | Sbjct 757855 TTGCCGGTCTCCGTCTGGGCCTCGAGGATGGAGTACCACAGCTTCTGCGCACGAATGGTC 757796 Query 145829 TGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAG 145888 | || |||||||| | |||||| || ||| || |||| ||| | |||||| Sbjct 757795 TTGCGGCCACGGCCCTCCTTTTCGTACTTTTCGTACAGGGCCTCGAACTCTTGGCCGTAG 757736 Query 145889 CAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTG 145948 || |||| |||||||| || | |||||| ||||| |||| ||| || ||| | | Sbjct 757735 CAGTCGGCGAGGCCGGGGCATTCGTTGGGGCACATGAGCGTCCAGTCGAGGTTCTTCTCG 757676 Query 145949 ACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAA 146008 || |||| ||| || | ||| || | ||| || || | || ||| || || | Sbjct 757675 ACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCCAGGAACAGGTCCCGGGCACGGACC 757616 Query 146009 TCCTCAGCACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCGCGTGCCAC 146065 ||||| ||||| ||| || ||| | || | ||| ||| ||| |||||||| Sbjct 757615 TCCTC-CTTGCCATGGTTCTTGC-GCAAGTCGAGGA-ACTCGAAGACGTCGGCGTGCCAG 757559 Query 146066 GGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGT 146122 || |||| |||| |||| ||| || || ||||| |||||||| |||| | Sbjct 757558 GGCTCAAGGTAGATTGCGAAGGCGCCGGGGCGCTTGTTGCCGCCCTGGTCGACGTATCTG 757499 Query 146123 ACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAG 146182 | ||||||| ||||||| | |||||| | |||| ||| || || || | Sbjct 757498 GCGGTGTTGTTGTAGACGCGGAGCATGGGAATAATGCCGTTGGAGGTTCCATTGGTTCCG 757439 Query 146183 TTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-GCCGTA 146241 || || ||| || || | || || || |||| |||| || || ||| | Sbjct 757438 GCGATATAGGAGCCAGTGGCACGGATGCGGTGGACGTTCAGACCGATGCCACCAGCCAT- 757380 Query 146242 CTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCG--CT 146298 |||||| || |||||| ||| ||| || ||||||||||| || ||||| ||| || Sbjct 757379 CTTGGAGATCATGGCGCACGTC-TTGAGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCT 757321 Query 146299 TCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAA 146358 || ||| ||| || ||||||||| ||| ||| ||| || || || || ||| | Sbjct 757320 TC--ATGTCGACCAAGAAGCACGAGGACAGCTGGGCCTGGGGGGTTCCGGCGTTGAAGAG 757263 Query 146359 CGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTTCGATAGCGTC 146418 || || ||||||||| || | || | | ||| | || || |||| | Sbjct 757262 GGTGGGAGACGCGTGCGTGAAGAACTTGCTGGACATGAGATTGTATGTCTCGAGGACTCG 757203 Query 146419 TTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTC 146478 | |||||||| || ||||| | ||||| | ||||| |||||| || || ||||| Sbjct 757202 CTCGATGTCGTCTCCCCAGATGCCGACGGCGACTCTCATGATCATGTGCTGAGGACGCTC 757143 >seq1 Length=5717297 Score = 156 bits (172), Expect = 4e-33 Identities = 357/523 (68%), Gaps = 17/523 (3%) Strand=Plus/Minus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 || || ||| | |||||||| |||| ||||| || ||||| || | | | Sbjct 4504141 ATTCCCTGCATCCGCAAGAAGGCCGATTGGGCCCTGCGATGGATTTCGGACAAGAACTCC 4504082 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 || || ||| ||||| | || |||||||| || ||||| |||| ||| || | Sbjct 4504081 ACCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTTAGCGGTGCT 4504022 Query 46204 TTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262 ||||| |||| || | |||| || | || | ||||||||||||| || || ||| Sbjct 4504021 TTTGCATCCATTTTCTGGCTCAAGAAGCGCGGTC-TCATGCCCGGCCTCACCTTCTCCAA 4503963 Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACAC 46322 |||||| || || || |||||||| || || ||||||||||| ||||||| ||| Sbjct 4503962 CGAGCTCATCTCTCGTGACGAGGGTCTCCACACGGACTTTGCCTGTCTCTTG-----CAC 4503908 Query 46323 TCGCGTGCACGACAAGCTTGC--GCCCGACACCGTGCTGAGC-ATGTTCAAGGAGGCGGT 46379 |||| || ||| | ||| || | || | |||| || ||| || || || Sbjct 4503907 TCGCACCTCCG-CAACCGTGCCAGCAAGGAGTCGATCCGAGCCATCATCACCGATGCCGT 4503849 Query 46380 GGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC-G 46438 ||||| ||| |||||||||| || | || ||||| ||||||||||||||||||| Sbjct 4503848 CGCCATCGAGCAGGAGTTTTTGACCGAGGCCCTGCCGTGTGCCCTGCTGGGCATGAACTC 4503789 Query 46439 CACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACC 46498 ||| | ||| | ||||||||||| || || ||||| || ||| | | | || | Sbjct 4503788 CACCCT-GATGAAGCAGTACATCGAGTTCGTCGCCGACCGTCTCCTCAT-CGCCCTCGGC 4503731 Query 46499 AGC-CGAAGCATTTTC-ACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGA 46556 | | |||| || | | |||| ||| || || || || ||| | ||||||||||| | Sbjct 4503730 AACGAGAAG-ATCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGG 4503672 Query 46557 GGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTATAAG 46599 ||||| || || || || || ||||| ||||| || ||| || Sbjct 4503671 CGGCAAGACCAACTTCTTTGAGAAGCGTGTCGGTGACTATCAG 4503629 >seq9 Length=1038790 Score = 143 bits (158), Expect = 3e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | ||| |||||||| || |||||||| ||| Sbjct 527149 CCACCACGCAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 527090 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| |||||||| || ||| |||| | |||||||||||| |||||| Sbjct 527089 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGG 527030 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || |||| |||||||| Sbjct 527029 ATGCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGGACTCGACC 526970 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 |||| ||| | |||||||| || ||||| || |||| Sbjct 526969 TCGAGGGTGATTGTTTTACCCGTGAGAGTCTTGACGA 526933 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | || | ||| |||||||| || ||||||||||| | Sbjct 526818 CCACCGCGAAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGAC 526759 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| || |||||||| || |||| | || |||||||| |||||| Sbjct 526758 AAAGTGCGGCCATCCTCGAGTTGCTTGCCAGCAAAGATGAGGCGTTGCTGGTCAGGAGGG 526699 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || |||| ||||| | Sbjct 526698 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCAATGGTGTCGGACGACTCCACC 526639 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || ||||| ||||| || ||||| ||||||||| Sbjct 526638 TCGAGGGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATCTGCATG 526591 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || | || | ||||| ||||| ||||||||||| ||| Sbjct 527377 CCACCACGCAGACGCAGGACCAGGTGCAATGTCGATTCCTTCTGAATGTTGTAGTCGGAG 527318 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || | ||||||||| ||| | || || |||||||| || || || Sbjct 527317 AGGGTCCGACCGTCTTCCAACTGCTTGCCCGCGAAAATCAATCGCTGCTGATCAGGGGGA 527258 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | ||||| | Sbjct 527257 ATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCCGATGACTCAACC 527198 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || | || || ||||| |||||||| Sbjct 527197 TCGAGCGTGATGGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 527151 >seq3 Length=3706406 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| | ||| || | || | ||| |||||||| || |||||||| ||| Sbjct 1555248 CCACCACGCAGCCTCAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1555189 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 1555188 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 1555129 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 1555128 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1555069 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || || || || |||||||||||||| Sbjct 1555068 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 1555022 >seq7 Length=1181343 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | ||| || || || ||||||||||| ||| ||| Sbjct 1039483 CCTTCTGGATGTTGTAGTCGGAGAGGGTCCGGCCATCTTCGAGCTGCTTGCCGGCGAAGA 1039542 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||||||||| || ||||| || || ||||| ||| || ||||| | | Sbjct 1039543 TCAATCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1039602 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| |||| ||||| ||| ||||| || || || || |||| Sbjct 1039603 CGATCGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTCACGA 1039662 Query 131225 AA 131226 || Sbjct 1039663 AA 1039664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012628895360