Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02]
29 sequences; 27,200,907 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq5 140 2e-28
seq9 91.5 1e-13
>seq5
Length=2237531
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 171232 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 171291
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 171292 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 171326
>seq9
Length=1038790
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
|| || ||||||||||| || || ||||| || ||| || |||| || | ||
Sbjct 527581 TGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCGTCTTCGAGCTGC 527522
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
|| || || || || ||||| || ||||| | || | |||||| |||||| ||| ||
Sbjct 527521 TTACCAGCGAAGATAAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGAATCTTC 527462
Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294
|| || || | || || || | ||| || || | ||||| ||||||||||||
Sbjct 527461 GATTTAACGTTGTCGATGGTGTCGCTTGATTCGACCTCGAGGGTAATGGTTTTACCCGTC 527402
Query 38295 AAGGTTTTCACGAATATCTGCAT 38317
||||| || ||||| ||||||||
Sbjct 527401 AAGGTCTTGACGAAGATCTGCAT 527379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334947081617099
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |