Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1 156 5e-33 >seq1 Length=5717297 Score = 156 bits (172), Expect = 5e-33 Identities = 375/561 (67%), Gaps = 11/561 (2%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || |||||||| || || | ||| ||||| || || || | ||| ||| ||| || | Sbjct 4503918 CAGGCAAAGTCCGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGG 4503977 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | || || || ||||||||||| || || || |||||| ||| ||| || Sbjct 4503978 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAAATGGATGCAAAAGCACCGCTAAAGAAG 4504037 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-CT 93270 ||||| || ||||| ||||| || || | ||| | |||||| | ||| || || | Sbjct 4504038 ATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAA---GGTGGAGTTCTTGTCC 4504094 Query 93271 G--ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 | |||||| | ||||||||||| || || || || || | || |||| ||| Sbjct 4504095 GAAATCCATCGCAGGGCCCAATCGGCCTTCTTGCGGATGCAGGGAATCGTGTCGACGGCG 4504154 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 || || |||| |||| | | | || ||||| || || || | || || || Sbjct 4504155 TTGAAGAGGTGCGTCCGCTGGGCGGTGTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAG 4504214 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 | || || |||| |||||||| || ||||| |||||||| || | || || | | Sbjct 4504215 GTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCACCGGGCCTCAGGG 4504274 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 ||||| || ||| |||| ||| || || || || ||||| || ||||| || || Sbjct 4504275 ATCTGGACCTCTCCGCTGAATCGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAGGCG 4504334 Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCC 93565 ||||| || || | || || || || | ||| || || || || | | || | | Sbjct 4504335 GCAAAGAAGGCGAGGATGTGGGAGATGAAGTATTTTTCGTCCTCGTTCAGGCGGTTGTTC 4504394 Query 93566 CAATCG-GATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 || ||| || | || || || || |||| |||||| | ||||| || || || || || Sbjct 4504395 CAGTCGTGAGTG-TCCTTGGACAGGTCGATCTCTTCGGCGGTCCAGAATGAGGCCTCGGC 4504453 Query 93625 TTTTTTGTACATATCCCATAT 93645 || |||||||| | ||| || Sbjct 4504454 CTTCTTGTACATTTGCCAAAT 4504474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860598137960